Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq223 232 5e-56 seq170 111 1e-19 >seq223 Length=2232465 Score = 232 bits (256), Expect = 5e-56 Identities = 521/775 (67%), Gaps = 6/775 (1%) Strand=Plus/Plus Query 20002 TCTGTATTTGGAATGCAATCTCGATATAACTTGAGAAATGAATTTCCCTTATTAACTACG 20061 || || ||||| ||||| | || || | | || | |||||||||| | | || || Sbjct 1612394 TCGGTGTTTGGCATGCAGGCCCGCTACAGCCGGAAAGATGAATTTCCACTGCTGACAACC 1612453 Query 20062 AAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACA 20121 ||| | || || ||||| || ||| | || ||||| | |||||||| || ||||| ||| Sbjct 1612454 AAATGTGTGTTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGGTTTATCAAGGGATCCACA 1612513 Query 20122 AATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGAT-CTAAGCA 20180 || ||| ||||| |||||||| || || ||| || ||||| | || | Sbjct 1612514 AAAGCTAAAGAGCTATCTTCCAAAGGAGTGAAAATCTGGGATGCCAATGGACACCGAG-A 1612572 Query 20181 ATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGG 20240 ||||| | ||| ||||| ||| | |||| || || || || | || ||||| Sbjct 1612573 CTTTTTGGATAGCCTGGGATTATCCAAAAGAGAAGAAGGTGACTTTGGCCTAGTTTATGG 1612632 Query 20241 ATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACA 20300 || || ||||| ||||||||||| ||||| || ||| | || |||||| || || Sbjct 1612633 CTTCCAGTGGAGGCATTTTGGAGCAGAATACAAAGATATGGATTCAGATTATTCAGGTCA 1612692 Query 20301 AGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAG 20360 |||||| | ||||| || || || ||| || || ||||| ||||| | |||||||| Sbjct 1612693 AGGAGTT-ACCAATTGCAGAAAGTGATTGATACCATCAAAACCAACCCTGATGACAGAAG 1612751 Query 20361 AATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCA 20420 ||| || | | || |||||| | |||||| | ||| | ||| | | ||||| || || Sbjct 1612752 AATCATCATGCGTGCTTGGAACCCAAAAGATCTTCCTCTGATGACACTACCTCCGTGCCA 1612811 Query 20421 TATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATC 20480 | | ||||| || ||||| | || |||| || | | || |||| || | || Sbjct 1612812 TGCCTTCTGCCAGTTCTACGTGGTGAACGGTGAACTGACC-GCCAGCTGTACCAGCAGTC 1612870 Query 20481 CGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATAT 20540 | || | ||| |||||||| || ||||| ||||| || || | ||||| ||||| | Sbjct 1612871 AGGAGACACGGGCCTGGGTGTGCCGTTCAACATTGCCAGCTACTCCCTGCTCACGTACAA 1612930 Query 20541 GATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCA 20600 ||| | || | || | | | || | |||||||| || || || | ||||| || || Sbjct 1612931 GATCACGCACATCACTGGTCTGAAGCCAGGTGACTTTGTACATACTTTGGGAGATGCACA 1612990 Query 20601 TATTTACCTTAATCATATAGAACCTTTAAAATTACAG-TTAACACGACAACCAAAACAAT 20659 ||||||||| ||||| | || || | || | ||| || | | || |||||| || | Sbjct 1612991 TATTTACCTGAATCACGTGGAGCCGCTGAAGATTCAGCTTCAGA-GAGAACCAAGACCTT 1613049 Query 20660 TCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATT 20719 | || | || || | ||| ||| | ||| | ||||| |||||||| || | Sbjct 1613050 TTCCGAAGCTCAAAATCCTTTGAAAAGTTGAGACAATTGATGATTTCAAAGCTGAAGACT 1613109 Query 20720 TTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTA 20774 || | | |||||||| |||| ||| | ||| |||||||||| || |||| Sbjct 1613110 TTAAGATTGAAGGTTACAATCAGCATCCAACCATTAAAATGGAAATGGCTATTTA 1613164 >seq170 Length=3845361 Score = 111 bits (122), Expect = 1e-19 Identities = 360/550 (65%), Gaps = 8/550 (1%) Strand=Plus/Minus Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133 ||||| || ||| ||| |||||| | | |||||| || ||||| ||||| ||| || Sbjct 2789509 TGGAAGGGTGTT-TTGGAGAGTTGCTGTAGTTTATCAAGGGATCCACAAACGCTAAAGAA 2789451 Query 20134 CTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCT-AAGCAATTTTTACACAG 20192 || || ||||| || | ||||| || ||| ||| |||| |||| |||| Sbjct 2789450 CTGTCTTCCAAGGGAGTGAAACTCTGGAGTGCCAATGCATCCCAAGCC--TTTTGGACAG 2789393 Query 20193 CAATG-GATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGA 20251 | || |||| |||| | | | ||||| ||||| || || ||| |||| |||| Sbjct 2789392 -ACTGAGATTCTCCAACAGAGAGAAAGGGGACTTGGGCCCAGTCAGTGGCTTTCCGTGGA 2789334 Query 20252 GACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATC 20311 | |||||||| || |||| || ||| | || || ||| || ||||||| || | Sbjct 2789333 GGCATTTTGGGGCACAATACAAAGATATGGATTCAGATCATTCAGGTCAAGGAGCTGACC 2789274 Query 20312 AATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTAT 20371 | ||||||| | | | | || | ||| ||||| | ||||||||||| || | Sbjct 2789273 GACTACAAAAACTGACTGAGACCATCAGAACCAACCCTGATGACAGAAGAATCATCACGT 2789214 Query 20372 GCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCC 20431 | || | ||| | |||||| ||| ||||| |||||||||| || || |||| Sbjct 2789213 GTGCTTATAACTC-AAAGATCCTCCTCCCATGGCGCTGCCTCCATGCCAGGCCCTCTGCC 2789155 Query 20432 AATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGG 20491 | |||| ||| | | | ||| ||| || || || | || | || | || |||| Sbjct 2789154 AGTTTTTCGTGGTGACTGGTGAGCTGTGCTGCCAGCTGCACCAGTGGTCAGGAGACATGG 2789095 Query 20492 GACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATG 20551 | |||||||| | ||||| || || || | | ||| | || | ||||| | || Sbjct 2789094 GCCTGGGTGTGCGGTTCAACATGGCCAGCCACTCCCTGGTCACCTGCATGATGGTGCACT 2789035 Query 20552 TTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTA 20611 | | | ||| | |||||||| || || ||| | ||||| || | ||||| ||| | Sbjct 2789034 CCGCGGGTCCAAAGCCAGGTGACTTTGTACATACCTTGGGAGATGCACGTATTT-CCTGA 2788976 Query 20612 ATCATATAGA 20621 |||| || || Sbjct 2788975 ATCACATTGA 2788966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399146086626385