Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq46 102 6e-17 >seq46 Length=13992998 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | |||| ||| || || ||| ||||| ||||||||||| Sbjct 3038133 CCACCCCTCAGGCGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 3038074 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || ||||| || || || || || || | || ||| ||||||||||| Sbjct 3038073 AGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 3038014 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || || ||| || || ||| || | | | | |||| | ||||||| Sbjct 3038013 ATCCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 3037954 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||| ||| || |||||||| ||||| || || || ||||||||||| ||| Sbjct 3037953 TCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCATTTTG 3037903 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| || ||| ||||| || |||||||| Sbjct 3038609 GCCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGA 3038550 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || || || || || || || || || | || ||| ||||||||||| Sbjct 3038549 AAGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGG 3038490 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||| || || || || || ||| || | | | | |||| | |||||| Sbjct 3038489 GATACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 3038430 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327 ||||| ||| || |||||||| ||||| ||||||||||| Sbjct 3038429 CTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAA 3038391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395037676868653