Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq126 262 4e-65 seq118 188 7e-43 seq22 123 2e-23 seq36 95.1 1e-14 seq10 84.2 2e-11 >seq126 Length=6050536 Score = 262 bits (290), Expect = 4e-65 Identities = 632/947 (67%), Gaps = 22/947 (2%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | | || || || ||||| | Sbjct 4678231 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 4678289 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 ||||||| | ||||| || |||||||||||||| || || |||||||| |||| || Sbjct 4678290 CTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCTC 4678349 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 |||||| ||||| |||||| | | || || || | |||| ||||| | | | Sbjct 4678350 CATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGCATAAG 4678409 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 | | ||||| | |||||||| | || |||||| | | ||| || || || || Sbjct 4678410 TGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCTT 4678469 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC-CTCGTTTATAATAA 14153 |||| | | || | || || | | ||| ||||| || || || | Sbjct 4678470 CCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTATTTC 4678529 Query 14154 TCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAAT 14213 | || | | | | || || | | || ||||| | || | || ||||| | Sbjct 4678530 TTTTACTCTCTGC-TCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAGT 4678588 Query 14214 CACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCA 14273 |||| || | ||||||||||| ||||||||||| || |||||||| || ||||||| Sbjct 4678589 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCATCA 4678647 Query 14274 ATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAA 14333 ||||||||| || | ||| ||||||| || || || || ||||| || ||||| || | Sbjct 4678648 GTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCCA 4678707 Query 14334 CTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTC 14393 |||| ||||| |||| | ||||||||| | | || | ||||| | ||||| Sbjct 4678708 CTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCA 4678767 Query 14394 TAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTT 14453 |||| | | || || || | | || |||| ||||||||||||| || | | || Sbjct 4678768 AGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAAATT 4678827 Query 14454 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 14513 || | |||| | | | |||||| || |||||||| | |||||||||||||| || | Sbjct 4678828 CCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAA 4678887 Query 14514 TGTTTTCCATAGCTATCTGAAAA---------CCATAAAAACATCTAGCTTCTGACCATT 14564 |||||||||| || || || || | ||| ||||| | || |||| | Sbjct 4678888 TGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAATCT 4678947 Query 14565 GTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAA 14624 | || ||| | ||||| ||| |||| |||||||| ||||| |||||||| ||||| | Sbjct 4678948 GAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCGA 4679007 Query 14625 AAAATGCC--AATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATC 14682 |||| ||| || |||| | || |||||| ||||| | | || ||| | Sbjct 4679008 AAAAAGCCAGAACATGTGAT--ATGAAGTATCTCTCTTTGGGCTTCAAGGTTGCCCAGT- 4679064 Query 14683 GGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTT 14740 ||| || |||||||||||||| || || ||| | ||||| ||| | | ||||| Sbjct 4679065 -GCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGCTTTC 4679123 Query 14741 TTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 ||||||||| ||| || || | ||| |||||||| | ||||| Sbjct 4679124 TTATACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 188 bits (208), Expect = 7e-43 Identities = 398/588 (68%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 13927 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13986 || || ||| |||||||| || ||||| |||| || || |||||||||||||||||||| Sbjct 3435612 AATTCATTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAA 3435671 Query 13987 TGGATTTGTTGACATAAACACTTTATCACAA-CCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||||| || | || || || | | || || ||||||| |||||||| | || | Sbjct 3435672 GGGATTTTCTGCCTGGAAAACCTT-TGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCA 3435730 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 |||||| |||| || | ||| ||| ||||||||| || | || || || | Sbjct 3435731 CAAACTCAGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAG 3435790 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 | |||||||| || | || || |||||||| | || || | | | | | Sbjct 3435791 CTTCTGTTAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCT 3435850 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAAC--ACGCAAAATCACAATGAAG 14223 | | ||||| ||||| || || | ||||| | | ||||| ||||| || || Sbjct 3435851 CTTCTGAAGGCT--TATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAG 3435908 Query 14224 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 || |||||||| || |||||||| || ||||| || | ||| | ||| | ||| || Sbjct 3435909 ACCTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTT 3435968 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 |||| | | ||||| ||||| || ||||| || ||||| |||| || || |||||||| Sbjct 3435969 CTTTAGCTAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAA 3436028 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || | | || ||| || || | | |||| | | | ||||||| | ||| || Sbjct 3436029 GGCCACCACTCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAAGGTCCAATC 3436088 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTT 14463 | |||||| | || | | |||||||||||| ||||||||||| ||| | | || Sbjct 3436089 TGCTTTTTTCTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTT 3436148 Query 14464 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511 | | || ||||| || || | || || || ||||| || ||||| Sbjct 3436149 GGGATCTG--ATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTG 3436194 >seq22 Length=23169006 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| ||||||||||| || |||||||| | || ||||||| ||||||||| | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| | Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 14346 CTATTAATCGTTCTCC 14361 ||| | |||||||| Sbjct 2785786 CTACAACACGTTCTCC 2785771 Score = 104 bits (114), Expect = 2e-17 Identities = 108/139 (78%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | | || || || ||||| | Sbjct 2788375 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 2788317 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||||| | ||||| || |||||||||||||| || ||||||||||| ||||| || Sbjct 2788316 CTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTC 2788257 Query 13975 CATAAAATCAAATGGATTT 13993 |||||| |||||||||||| Sbjct 2788256 CATAAAGTCAAATGGATTT 2788238 >seq36 Length=16585812 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | | || || || | ||| | Sbjct 11366890 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCTCATCCT 11366948 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||||| | ||||| || |||||||||||||| || |||||||| || ||||| || Sbjct 11366949 CTGATATTCCCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGGGAAATATTCTC 11367008 Query 13975 CATAAAATCAAATGGATTT 13993 |||||| |||||||||||| Sbjct 11367009 CATAAAGTCAAATGGATTT 11367027 >seq10 Length=38611459 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 119407 GAAGGTAATCATGGATTACATGTACACGAGTTCGGTGATGAAACTAATGGGTTTTTGAGT 119466 |||||| |||| ||||| ||||| || |||| || ||||| || | || | ||| ||| Sbjct 19909084 GAAGGTTATCACGGATTCCATGTCCATCAGTTTGGAGATGATACACAAGGCTGTTTCAGT 19909143 Query 119467 ATGGGGAATCATTATAATCCTGAAAATAAAAAACATGGTAGCCCTTTTAATAATGAGAGG 119526 || ||| | ||||||| || | |||||||||||| | || || | || ||| Sbjct 19909144 GCAGGTCCTCACTTTAATCCTCAATACAAAAAACATGGTGGACCAAAGGATGAAGATAGG 19909203 Query 119527 CATATTGGAGATCTGGGAAAT 119547 ||| ||||||||||||| ||| Sbjct 19909204 CATGTTGGAGATCTGGGCAAT 19909224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482298613509240