Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq22 93.3 8e-14 seq126 84.2 4e-11 >seq22 Length=23169006 Score = 93.3 bits (102), Expect = 8e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| ||||| ||||||||||||||| |||| | || ||||| || |||| Sbjct 2785781 TTGTAGCCTTTGCGGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCT 2785840 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || ||||||| | || | ||||||| ||||| | |||||||| Sbjct 2785841 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGA 2785886 >seq126 Length=6050536 Score = 84.2 bits (92), Expect = 4e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| ||||| ||||||||||| ||| |||| | || || || || |||| Sbjct 4678725 TTGTAGCCTTTGCAGCAGTGGAAGGAATCTTTTTTTCTGGTTCTTTTGCCTCAATATTCT 4678666 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | ||||||| | ||| | |||||||| | ||| || | Sbjct 4678665 GGCTCAAGAAACGAGGACTGATGCCTGG-CCCACATTTTCCAATGAACTTATTAGCAGAG 4678607 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076 | || ||| | || | |||||||| || || || | ||| Sbjct 4678606 ATGAGGGTTTACACTGTGACTTTGCCTGACTGATGCTCAAA 4678566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989485192202315