Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq126 336 3e-87 seq118 170 3e-37 seq138 156 6e-33 seq22 123 3e-23 seq1 111 2e-19 seq4 107 3e-18 >seq126 Length=6050536 Score = 336 bits (372), Expect = 3e-87 Identities = 444/610 (73%), Gaps = 17/610 (3%) Strand=Plus/Plus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 ||||| | ||||| || || || || ||||||| |||||| ||||| ||||| | ||| Sbjct 4678564 TGTTTGAGCATCAGTCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 4678623 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 |||||||| ||| | || ||||| || || || || || ||||| ||||| || ||||| Sbjct 4678624 TTGGAAAATGTGGG-CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAA 4678682 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 36319 || |||||||| || |||||||| ||||| |||||||| | || | |||||||| | Sbjct 4678683 GAACCAGAAAAAAAGATTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTA 4678742 Query 36320 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379 | | |||| ||||| |||| | | |||||||| || |||||| ||||| Sbjct 4678743 GCCTCTTTGTCCCCAATCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATT 4678802 Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439 | || |||||||| |||||| | | |||| | |||||||| || || ||||| Sbjct 4678803 ATTTCAATAGCATTGAAGAGAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATA 4678862 Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT-GAAAT--------CCG 36490 | |||||||||||||| |||||||||||||| ||||| |||| | ||| | Sbjct 4678863 AGGAGACTATACATTTCAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTA 4678922 Query 36491 TAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCA 36550 |||||||| | ||||| |||||||| |||||| | ||||||||| | || |||||| Sbjct 4678923 TAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCA 4678982 Query 36551 TTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 36610 || ||||| || ||||| ||||| ||||| |||| |||||| ||| || ||| | || Sbjct 4678983 TTTACTATGCCATCACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTC- 4679041 Query 36611 TTTGGTGTT--AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 36668 ||||| || || || ||| | | || || ||||| | |||||| || || | | Sbjct 4679042 TTTGGGCTTCAAGGTT-GCCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCG 4679100 Query 36669 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAA 36728 |||| || || |||| || || |||||||| | ||| |||||||| |||| || |||| Sbjct 4679101 TCCACAAAGACACCTCCGCTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAA 4679160 Query 36729 AAATAACAAA 36738 | || ||||| Sbjct 4679161 AGATGACAAA 4679170 >seq118 Length=6727830 Score = 170 bits (188), Expect = 3e-37 Identities = 552/853 (65%), Gaps = 28/853 (3%) Strand=Plus/Plus Query 35887 tttttCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATT 35946 ||| || || ||||| ||||| |||| || || ||||||||||| ||||| || ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 35947 GATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTC 36006 | | ||| ||| ||||| | ||| || ||||| | || ||||| || Sbjct 3435678 TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTC 3435737 Query 36007 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT 36066 |||| | |||||| |||||||||||| | || |||||| | ||| | || Sbjct 3435738 AGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGT 3435797 Query 36067 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACT 36126 | ||| || || ||||| ||| || || | || || | ||| | ||||| Sbjct 3435798 TAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTGA 3435857 Query 36127 CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTC 36186 || || | || | | ||| |||| | || || || ||||| ||||| || || Sbjct 3435858 AGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATC 3435917 Query 36187 TCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 36246 ||| || || | ||| |||||||| |||||||| | ||| || | | ||| || ||| | Sbjct 3435918 TCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTA 3435977 Query 36247 AAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 36306 ||||| | ||||| ||||| || |||||||||| |||||| || |||||||| | | Sbjct 3435978 GAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCAC 3436037 Query 36307 TCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 ||| || || || | | || | ||||| | |||||| || || || Sbjct 3436038 TCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTTTT 3436097 Query 36364 TTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTT 36423 | ||||| |||||||| || || ||||||| | | | | ||| || |||| Sbjct 3436098 CTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATCTG- 3436156 Query 36424 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 36483 | || || || | | | ||| ||||| || || |||| || || ||| ||||| Sbjct 3436157 -ATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAGAATTTG 3436215 Query 36484 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAA 36543 | || | ||| | | |||| ||| ||| ||| | |||| Sbjct 3436216 TGAACCTCTGGAACCTGCA-CCTC------CTGA----CTG-ACACCA-CGTT------- 3436255 Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 |||||| | ||||| ||||||||||||||||| || || | || | |||| Sbjct 3436256 ---TTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAATA 3436312 Query 36604 TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 36663 ||| || | || | | || || ||||| | | || |||||| |||| || || ||||| Sbjct 3436313 TTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTCTTC 3436372 Query 36664 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 36723 ||||||| || ||||| | | ||| ||| || | ||||| | ||| | || || || Sbjct 3436373 TGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTGGAT 3436432 Query 36724 TGGAAAAATAACA 36736 || ||| || ||| Sbjct 3436433 TGCAAAGATGACA 3436445 >seq138 Length=5313849 Score = 156 bits (172), Expect = 6e-33 Identities = 166/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 9215 CTATTTTAAACTTTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAG 9274 || |||| || ||| || |||||| | |||||| || | | | ||| |||| ||| || Sbjct 4255723 CTGTTTTCAA--TTACTTTTTATTAACTGCTTCCAGAAACCGCAGCAGGTGCAGGAATAG 4255780 Query 9275 ATTGATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTT 9334 |||||||||||||||||||| |||| | || | ||| || |||||||| || || || Sbjct 4255781 ATTGATGATATCCAAGTAGAGGCTGATGGCAGCCAGCACGTACTCTTCAGGTGACAGTTT 4255840 Query 9335 ATGTATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGC 9394 ||| || ||||| || ||||||||||| ||||| || ||||| | |||||| || ||| Sbjct 4255841 ATGCATCAGTGAATGTGTGTCATAGATGATGAACCCACAGAAAAGAAGGGCTCCCGCAGC 4255900 Query 9395 AGACAGGACCAGCTCCACTGTTTCACTTTGCACAAATA 9432 || || ||||| ||||| ||||||| | | | ||||| Sbjct 4255901 AGCCAAGACCAACTCCATTGTTTCATTATAAAAAAATA 4255938 Score = 138 bits (152), Expect = 1e-27 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| || ||||||||||| |||||||||||||||||||||| | |||| Sbjct 4260290 CCTGCTCCAAATTTGCTAAAATCTCTCTTAGATTGTAGAGTATATGCAGTCAAACCAAGG 4260349 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||||| |||||||| || |||||||||| || | || ||||||||||||||||| Sbjct 4260350 AATACTGCTGTAGTCAGTATAAAAGCTTGCAGAATAATATAGACATCATAGAAAGTAAC 4260408 Score = 96.9 bits (106), Expect = 5e-15 Identities = 89/109 (82%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || | |||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct 4271243 CCATGCGGACGTGCACGCTGGCGGAGGCCACAGAGCTGCCGTAGTTGAAGTCATCCTCGA 4271302 Query 9907 TGGAGGAGCACGCGTA--GAGGCTCGGCA-TGGCCATGGCGGC-GCAGA 9951 |||||||||| | || | || |||| | |||||||| |||| ||||| Sbjct 4271303 TGGAGGAGCAGGGATAACGGGGGTCGGGACTGGCCATGTCGGCGGCAGA 4271351 >seq22 Length=23169006 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||||||||||| Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 36300 C 36300 | Sbjct 2785786 C 2785786 Score = 113 bits (124), Expect = 6e-20 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || || ||||| | |||||||||||||| |||||||||||||| ||||| Sbjct 2782831 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGC 2782772 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | ||||| |||||||| |||||| | |||||| || Sbjct 2782771 AATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 2782712 >seq1 Length=73491278 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| |||| ||| |||||||||||||| | || || || || || || || || | | Sbjct 30965877 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAAGA 30965818 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 30965817 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 30965758 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||||||||| || || ||| |||||| |||||||| || ||||| Sbjct 30965757 GTTCTACCGTGGTGACCCCACTATATAAGCCTTGGATTACTTTCAT 30965712 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 31008377 TCCAGCCGTAGAAGTGCATACTAGTCAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 31008318 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| || |||||||| || || || || || || || |||||| | | || || | Sbjct 31008317 TCAAAGACTGGCTTTGATCAATAAAAGCACCTCTCTCGGCTGCCATTGTGAGGACAGTTT 31008258 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | ||||||||| | ||||||||||| |||| | || || |||| Sbjct 31008257 TCTGAGAAATTTCCCATACAGTTTTATAAAGCTGCTTCAGGTCATCAGGAA 31008207 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | Sbjct 31005464 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 31005405 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 || |||||||| |||| || ||||| ||||| || || ||||| || || | | |||| Sbjct 31005404 GATTCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAA 31005345 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 31005344 CTGTTTCTTATACCATA 31005328 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| ||||||||||| || | || | || |||| | Sbjct 30995012 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 30994953 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| || ||| | | || || |||||| Sbjct 30994952 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCA 30994893 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||||||| || || Sbjct 30994892 AGGCTCCAAGTAGATAGC 30994875 >seq4 Length=47749213 Score = 107 bits (118), Expect = 3e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| || Sbjct 24674282 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 24674223 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 24674222 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 24674164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658108685742120