Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq223 203 3e-47 seq12 138 1e-27 seq283 118 9e-22 seq170 107 2e-18 >seq223 Length=2232465 Score = 203 bits (224), Expect = 3e-47 Identities = 526/793 (66%), Gaps = 9/793 (1%) Strand=Plus/Minus Query 20864 CACCTTTCTCAAA--ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGC 20921 || |||| ||||| || || ||| |||||| || | || ||| | ||||||| | Sbjct 1613079 CAACTTT-TCAAAGGATTTTGAGCTTCGGAAAAGGTCTTGGTTCTCTCTGAAGCTGAATC 1613021 Query 20922 AGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCT 20981 ||| || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct 1613020 TTCAGCGGCTCCACGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGTACAAAGTCA 1612961 Query 20982 CCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATG 21041 || || |||| || |||| ||| | |||| ||||| || |||| ||||||||| ||| Sbjct 1612960 CCTGGCTTCAGACCAGTGATGTGCGTGATCTTGTACGTGAGCAGGGAGTAGCTGGCAATG 1612901 Query 21042 TTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCC 21101 || ||||| || || |||||| |||| | ||| |||||||||||||| || ||| || Sbjct 1612900 TTGAACGGCACACCCAGGCCCGTGTCTCCTGACTGCTGGTACAGCTGGC-GGTCAGTTCA 1612842 Query 21102 CCCCGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGG 21161 || ||||||| ||||| || || | || || ||||| || | |||| | | || Sbjct 1612841 CCGTTCACCACGTAGAACTGGCAGAAGGCATGGCACGGAGGTAGTGTCATCAGAGGAAGA 1612782 Query 21162 TCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGA 21221 || |||||||| || | ||| | ||| | | || | || | || || | Sbjct 1612781 TCTTTTGGGTTCCAAGCACGCATGATGATTCTTCTGTCATCAGGGTTGGTTTTGATGGTA 1612722 Query 21222 TCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTG 21281 || | ||| | ||| |||| || || ||||| || | | || | || Sbjct 1612721 TCAATCACTTTCTGCAATTGGT-AACTCCTTGACCTGAATAATCTGAATCCATATCTTTG 1612663 Query 21282 TACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGG 21341 || || || |||||||| ||||||||||| || || || | || | || || || Sbjct 1612662 TATTCTGCTCCAAAATGCCTCCACTGGAAGCCATAAACTAGGCCAAAGTCACCTTCTTCT 1612603 Query 21342 CGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTT 21401 | | || ||| | |||||||| | ||| || | || ||||| ||||| Sbjct 1612602 CTTTTGGATAATCCCAGGCTATCCAAAAAGTCTCGGTGTCCATTGGCATCCCAGATTTTC 1612543 Query 21402 ACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCC 21461 || || | || || || | | | ||||| ||| |||||||||||||||||||| Sbjct 1612542 ACTCCTTTGGAAGATAGCTCTTTAGCTTTTGTGGATCCCTTGATAAACCACAGCAACTCC 1612483 Query 21462 TCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCCCTGAGG 21521 |||| || ||| |||| ||||| | |||||| || | ||| ||||| || || | || Sbjct 1612482 TCCAAAACACCCTTCCAGAACACACATTTGGTTGTCAGCAGTGGAAATTCATCTTTCCGG 1612423 Query 21522 TTATATCGGGCCTGAAGCCCGAACACGGACCTGGTGCCCACGCCCGTCCTGTCCTCC-CT 21580 | || |||||||| | || ||||| ||| ||||| | |||| | ||| ||| | Sbjct 1612422 CTGTAGCGGGCCTGCATGCCAAACACCGACAGAGTGCCGGTGTCCGTGCGGTCGTCCTTT 1612363 Query 21581 CTGCACGCCGTGTTTAATAATTAAATCCAGGTGCGCCAAGTACTGCAGCTCGCCGTGGTC 21640 ||| | || | | ||| || | ||| ||| |||||||||||| || ||| | Sbjct 1612362 CTG-AAGCTGCAGCGGAGAATGTGCTCGATCTGCCCCAGGTACTGCAGCTCCCCATGGGC 1612304 Query 21641 --GCCGCGGCACG 21651 || ||||| || Sbjct 1612303 CGGCTGCGGCTCG 1612291 >seq12 Length=32490354 Score = 138 bits (152), Expect = 1e-27 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || |||| ||| ||||||| ||||| || |||| ||||||||||||||| |||| Sbjct 30593167 TCAGACCAGTGATGTGCGCGATCATGTACGTGAGCAGGGAGTAGCTGGCGATGTTGAACG 30593108 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || || |||||||| | |||| |||||||||||||||||||||||| || Sbjct 30593107 GCACACCCAGACCCATGTCTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCA 30593048 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||||| ||||| || | | || || ||||| || |||||| Sbjct 30593047 CCACGTAGAACTGGCAGAGGGCATGGCACGGAGGTAGTGCCATC 30593004 >seq283 Length=1095284 Score = 118 bits (130), Expect = 9e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 20914 GCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCA 20973 |||||| | ||| || |||| ||| || ||||| | || || ||||| || || | Sbjct 231055 GCTGAATCTTCAGTGGCTCAATGTGATTCAGGTAAATATATGCATCTCCCAAAGTATGTA 231114 Query 20974 CAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGC 21033 ||||||| || || |||| || |||||||| | ||||| ||| || || |||| || | Sbjct 231115 CAAAGTCACCTGGCTTCAGACCGGTGACGTGTGAGATCATATAGGTGAGCAGGGAGTGAC 231174 Query 21034 TGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGG 21093 |||| ||||| || || | || ||||| ||||| | ||| |||||||||||| |||| Sbjct 231175 TGGCCATGTTGAATGGCAAGCCCAGGCCTATGTCTCCTGACTGCTGGTACAGCTGACAGG 231234 Query 21094 ACAGCTCCCC 21103 | ||||| || Sbjct 231235 ATAGCTCACC 231244 >seq170 Length=3845361 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20955 GCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGA 21014 || || |||||||| || |||||||| || || | | |||| | ||| | |||| Sbjct 2788989 GCATCTCCCAAGGTATGTACAAAGTCACCTGGCTTTGGACCCGCGGAGTGCACCATCATG 2789048 Query 21015 TACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGAC 21074 | || | |||| || |||||| ||||| ||| | || || ||||||||||| | ||| Sbjct 2789049 CAGGTGACCAGGGAGTGGCTGGCCATGTTGAACCGCACACCCAGGCCCATGTCTCCTGAC 2789108 Query 21075 CTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGA 21134 | ||||| |||||||||| ||||||| || ||||| ||||||| || | | || Sbjct 2789109 CACTGGTGCAGCTGGCAGCACAGCTCACCAGTCACCACGAAAAACTGGCAGAGGGCCTGG 2789168 Query 21135 CAAGGAGGGAGAGCCAT 21151 || ||||| || ||||| Sbjct 2789169 CATGGAGGCAGCGCCAT 2789185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427735371038640