Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq126 105 5e-18 seq118 84.2 2e-11 >seq126 Length=6050536 Score = 105 bits (116), Expect = 5e-18 Identities = 129/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || ||||| || | |||||||| || ||||| | ||||||||||| Sbjct 4678720 GCCTTTGCAGCAGTGGAAGGAATCTTTTTTTCTGGTTCTTTTGCCTCAATATTCTGGCTC 4678661 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| || ||||| || | |||||||| || | |||||| | || || Sbjct 4678660 AAGAAACGAGGACTGATGCC-TGGCCCACATTTTCCAATGAACTTATTAGCAGAGATGAG 4678602 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGT 22924 ||| |||||||||||||||| || || || | | || ||| | ||||||||| Sbjct 4678601 GGTTTACACTGTGACTTTGCCTGACTGATGCTCAAACACCTGGGACACAAACCGT 4678547 >seq118 Length=6727830 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||| ||| | | | || || || || ||||| || ||||||| || Sbjct 3436033 TGGCCTTTGCTGCTGTAGAAAGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCTAGC 3435974 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||| | || ||| | || | | |||||||| || | || ||| | || | Sbjct 3435973 TAAAGAAGAGAGTTCTTATGTCTGGACTCACTTTTTCCAATGAACTTATCAGCAGAGATG 3435914 Query 22868 AAGGTCTACACTGTGACTTTGCTT 22891 ||||||| |||||||||||||||| Sbjct 3435913 AAGGTCTGCACTGTGACTTTGCTT 3435890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356199765934579