Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq46 100 3e-16 seq51 86.0 6e-12 seq158 82.4 8e-11 seq25 82.4 8e-11 >seq46 Length=13992998 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || |||||||| || ||||| || || | |||| Sbjct 3038121 CGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCA 3038062 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || || ||| |||| || | ||||| |||||||| || |||||||| Sbjct 3038061 TCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTA 3038002 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||||||||| | ||| | Sbjct 3038001 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 3037942 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| ||||||||||| |||||||| Sbjct 3037941 GTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCAT 3037907 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || |||||| |||| || | ||||| |||||||| || |||||||| Sbjct 3038536 TCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTA 3038477 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||||||||| | ||| | Sbjct 3038476 TCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATG 3038417 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAA 139755 ||||||||||||| || || || || Sbjct 3038416 GTCTTGCCGGTCAGGGTCTTCACAAA 3038391 >seq51 Length=12882142 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| | ||| || |||||| |||| || | ||||| || ||||| || |||||||| Sbjct 9170484 TCTTCAAACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATACCTTCTTTA 9170425 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||||||||| | ||| | Sbjct 9170424 TCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 9170365 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| |||||| ||| |||||||| Sbjct 9170364 GTCTTGCCAGTCAGGCTTTTTATGAAGATTTGCAT 9170330 >seq158 Length=4245986 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGT-GCTCGAGTCTTCGAGCTG 139620 |||| || ||||| ||||||||||| || || || || ||| | ||||| || || Sbjct 3727826 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTCCA-TCTTCCAGTTG 3727768 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| | || || | ||||||||| ||||| || ||||| || || ||| || Sbjct 3727767 CTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 3727708 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | ||| | ||| || | ||| || ||||| | || | ||||| || || Sbjct 3727707 GGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCTGT 3727648 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | |||||||| || || ||||| Sbjct 3727647 GAGGGTTTTTACAAAAATCTGCAT 3727624 >seq25 Length=21972308 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGT-GCTCGAGTCTTCGAGCTG 139620 |||| || ||||| ||||||||||| || || || || || | ||||| || || Sbjct 20948552 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCA-TCTTCCAGTTG 20948494 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| | || || | ||||||||| ||||| || ||||| || || ||| || Sbjct 20948493 CTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 20948434 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | || ||| | || || | ||| || ||||||| || | ||||| || || Sbjct 20948433 GGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCTGT 20948374 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | |||||||| || || ||||| Sbjct 20948373 GAGGGTTTTTACAAAAATCTGCAT 20948350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496015677165600