Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq126 349 5e-91 seq118 188 1e-42 seq22 132 7e-26 seq1 114 2e-20 seq4 107 3e-18 >seq126 Length=6050536 Score = 349 bits (386), Expect = 5e-91 Identities = 645/943 (68%), Gaps = 16/943 (2%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 |||| |||||| |||| | | |||| ||| ||| | || ||||| |||||||| Sbjct 4678229 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 4678288 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || |||| || || | || || || || ||||| ||||| |||| ||| |||| | Sbjct 4678289 TCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCT 4678348 Query 49730 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 49789 |||| || ||||||||||| || | ||| || | || |||| ||| || | Sbjct 4678349 CCATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGCATAA 4678408 Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849 | | ||||| || || || || | ||||| | | | | ||| || || || | Sbjct 4678409 GTGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCT 4678468 Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 49909 | | || | ||| |||| || || || ||| | | || ||| || || || Sbjct 4678469 TCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTATTT 4678528 Query 49910 ATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 49969 | | || | | || |||| || | ||||| | ||||| || || || | Sbjct 4678529 CTTTTACTCTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAGT 4678588 Query 49970 CGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTA 50029 | ||||| | |||||| ||||| ||||| ||||| |||||||| ||| | || ||||| | Sbjct 4678589 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCATCA 4678647 Query 50030 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTA 50089 | || || || || ||||| ||||| || ||||| || |||||||| ||||||||||| | Sbjct 4678648 GTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCCA 4678707 Query 50090 CTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCACTTTT 50146 |||| |||||||| |||| | |||||||| | || |||| ||||| Sbjct 4678708 CTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCA 4678767 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 |||| | | |||||||| || |||||| |||| |||| || ||||| |||||| | | Sbjct 4678768 AGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAAATT 4678827 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 |||| | |||||||| ||||| || || | |||||||||||||| ||||||| Sbjct 4678828 CCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAA 4678887 Query 50267 TGTTTTCAATGGCCATCT-GAAAT--------CCGTAGAAACATCTAGCCTCGGTAATCT 50317 ||||||| ||||| || | | ||| | |||||||| | ||||| ||||||| Sbjct 4678888 TGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAATCT 4678947 Query 50318 GCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 50377 | |||||| | ||||||||| | || |||||||| ||||| || ||||| ||||| | Sbjct 4678948 GAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCGA 4679007 Query 50378 AAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCAT 50437 |||| |||| |||||| ||| || | | | || ||||| | | | ||| | | Sbjct 4679008 AAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTTGGGCTTCAAGGTTGCCCAGTGCT 4679067 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497 || || ||||| | ||| || || || | ||||| || || |||| || || |||| Sbjct 4679068 GAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGCTTTCTTAT 4679127 Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||| | ||| |||||||| |||| ||| || || || ||||| Sbjct 4679128 ACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 188 bits (208), Expect = 1e-42 Identities = 554/853 (65%), Gaps = 28/853 (3%) Strand=Plus/Plus Query 49689 TTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 ||| || || ||||| |||||||||| ||| || ||||||||||| |||||||| ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 49749 GGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTC 49808 | | ||| ||| ||||| | ||| || ||||| | || ||||| || Sbjct 3435678 TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTC 3435737 Query 49809 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT 49868 |||| | |||||| |||||||||||| | || |||||| | ||| | || Sbjct 3435738 AGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGT 3435797 Query 49869 AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACT 49928 | ||| || || ||||| || || || | || || || || | ||||| Sbjct 3435798 TAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTGA 3435857 Query 49929 CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTC 49988 || || | || | | ||| |||| | || || || ||||||||||| || || Sbjct 3435858 AGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATC 3435917 Query 49989 TCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 50048 ||| || || ||||| |||||||| |||||||| | ||| || | | ||| || ||| | Sbjct 3435918 TCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTA 3435977 Query 50049 AAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 ||||| | ||||| || || || ||||| |||| |||||| || |||||||| || | Sbjct 3435978 GAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCAC 3436037 Query 50109 TCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||| || || || | | | || |||||| | |||||| || || || Sbjct 3436038 TCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTTTT 3436097 Query 50166 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 50225 | ||||| ||||| ||||| || ||||||| | | | | ||| || ||| | Sbjct 3436098 CTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATC--T 3436155 Query 50226 AACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTG 50285 | ||||| || | | | ||| ||||| || || |||| || || ||| || || Sbjct 3436156 GATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAGAATTTG 3436215 Query 50286 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAA 50345 ||| |||| | || |||||| || || | || | | Sbjct 3436216 --------TGAA--------CCTCTGGAACCTGCACCTCCTGACTGA------CA-CCAC 3436252 Query 50346 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATG 50405 |||||||| | ||||| ||||||||||||||||| || || | || | ||| Sbjct 3436253 GTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAATA 3436312 Query 50406 TTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTC 50465 ||| || | | | | || || ||||| | | || |||||| |||| || || ||||| Sbjct 3436313 TTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTCTTC 3436372 Query 50466 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGAT 50525 ||||||| || ||||| | | ||| ||| || | ||||| | ||| | || ||||| Sbjct 3436373 TGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTGGAT 3436432 Query 50526 TGGGAAAATAACA 50538 || || || ||| Sbjct 3436433 TGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 132 bits (146), Expect = 7e-26 Identities = 105/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || |||||||||||||||||||| ||||| ||||||| Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 50102 CAACAA 50107 | |||| Sbjct 2785786 CTACAA 2785781 Score = 109 bits (120), Expect = 8e-19 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| ||||| || || | |||||||||||||| |||||||||||||| ||||| Sbjct 2782831 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGC 2782772 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | ||||| |||||||| |||||| | |||||| || Sbjct 2782771 AATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 2782712 >seq1 Length=73491278 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| ||| | || || || |||||||| | Sbjct 31008377 TCCAGCCGTAGAAGTGCATACTAGTCAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 31008318 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || |||||||| || || || || || || || |||||| | | || || | Sbjct 31008317 TCAAAGACTGGCTTTGATCAATAAAAGCACCTCTCTCGGCTGCCATTGTGAGGACAGTTT 31008258 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | ||||||||| | ||||||||||| |||| | || || |||| Sbjct 31008257 TCTGAGAAATTTCCCATACAGTTTTATAAAGCTGCTTCAGGTCATCAGGAA 31008207 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | Sbjct 31005464 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 31005405 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 ||||||||||| |||| || ||||| ||||| || || ||||| || || | | |||| Sbjct 31005404 GATTCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAA 31005345 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 31005344 CTGTTTCTTATACCATA 31005328 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| ||||||||||| || | || || || |||| | || Sbjct 30995008 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 30994949 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | ||| || ||| | | || || | |||||| || Sbjct 30994948 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCAAGGC 30994889 Query 80059 TCCAAGTATATGGC 80072 |||||||| || || Sbjct 30994888 TCCAAGTAGATAGC 30994875 >seq4 Length=47749213 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || || ||||| |||||||| ||||| || ||||| || || | ||| || Sbjct 24674282 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 24674223 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 ||||| ||||| | ||||| || || || ||||| ||||||||||| || |||||||| Sbjct 24674222 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 24674163 Query 50104 ACAAGTCTCTCTCC 50117 || | ||| || || Sbjct 24674162 ACCACTCTTTCCCC 24674149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718198831640520