Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq223 141 1e-28 >seq223 Length=2232465 Score = 141 bits (156), Expect = 1e-28 Identities = 482/738 (65%), Gaps = 16/738 (2%) Strand=Plus/Plus Query 69896 CCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATG 69955 || ||| |||| ||||| ||| || ||||| || | |||||| | ||||| | Sbjct 1612439 CCACTGCTGACAACCAAATGTGTGTTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGGTTT 1612498 Query 69956 ATTTCCGGATCGACCAATGCCAAAGAGCTGAGC--CGAAAGGGTGTACACATTTGGAGCG 70013 || ||||| || || || |||||||| | | | ||||| || | || ||| | Sbjct 1612499 ATCAAGGGATCCACAAAAGCTAAAGAGCT-ATCTTCCAAAGGA-GTGAAAATCTGGGATG 1612556 Query 70014 GCAACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATC 70073 ||| | ||| | |||||||| || || || || | ||| |||| || || Sbjct 1612557 CCAATGGACACCGAGACTTTTTGGATAGCCTGGGATTATCCAAAAGAGAAGAAGGTGACT 1612616 Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 | || | ||| || || |||||||||||||| | || | | || ||| || Sbjct 1612617 TTGGCCTAGTTTATGGCTTCCAGTGGAGGCATTTTGGAGCAGAATACAAAGATATGGATT 1612676 Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193 |||| ||||| ||||| || ||| | |||||||||| | | ||||| || |||| |||| Sbjct 1612677 CAGATTATTCAGGTCAAGGAGTT-ACCAATTGCAGAAAGTGATTGATACCATCAAAACCA 1612735 Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253 | || || || || ||| | ||| | | ||||| || |||| | | | ||| Sbjct 1612736 ACCCTGATGACAGAAGAATCATCATGCGTGCTTGGAACCCAAAAGATCTTCCTCTGATGA 1612795 Query 70254 CACTACCACCGTGTCACTG--TTTGGCTCAGTTTTAC-TCGT--ACGATGGCAAATTGTC 70308 ||||||| ||||| || || || || ||||| ||| | || ||| || || || | Sbjct 1612796 CACTACCTCCGTGCCA-TGCCTTCTGC-CAGTTCTACGTGGTGAACGGTG---AACTGAC 1612850 Query 70309 ATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAG 70368 || |||| ||| | | |||| |||||| ||||| || || |||||||| || Sbjct 1612851 C-GCCAGCTGTACCAGCAGTCAGGAGACACGGGCCTGGGTGTGCCGTTCAACATTGCCAG 1612909 Query 70369 CTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGT 70428 ||| || || | ||| ||| ||| | ||||| || || ||||| | || || || Sbjct 1612910 CTACTCCCTGCTCACGTACAAGATCACGCACATCACTGGTCTGAAGCCAGGTGACTTTGT 1612969 Query 70429 ACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACT 70488 ||| || | || || || || | || | |||||| | ||||| | ||| | || || Sbjct 1612970 ACATACTTTGGGAGATGCACATATTTACCTGAATCACGTGGAGCCGCTGAAGATTCAGCT 1613029 Query 70489 CGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGA 70548 | | || || ||||||||||| ||||| | | | | |||||||| | ||||| Sbjct 1613030 TCAGAGAGAACCAAGACCTTTTCCGAAGCTCAAAATCCTTTGAAAAGTTGAGACAATTGA 1613089 Query 70549 CAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAGATTCCCAT 70608 ||| || ||||| |||| || |||||||| ||| | || | ||| || Sbjct 1613090 TGATTTCAAAGCTGAAGACTTTAAGATTGAAGGTTACAATCAGCATCCAACCATTAAAAT 1613149 Query 70609 GGTTCTGGCTGTTTAGAG 70626 || ||||| ||||||| Sbjct 1613150 GGAAATGGCTATTTAGAG 1613167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740987011570680