Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq55 122 8e-23 >seq55 Length=12078711 Score = 122 bits (134), Expect = 8e-23 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || || || || ||||| || | ||||||||||| ||||||||| |||||||||||||| Sbjct 2461462 GGTTATCTGGGTTGCCAAGCTTTGTCTGAGATGATCCAGTTTTACCTGGAAGAGGTGATG 2461521 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || || | || | |||||||||||| || ||||| || ||||||||| Sbjct 2461522 CCACAGGCTGAGAACCATGAACCAGGCATCAAAGAGCATGTGAACTCCCTAGGAGAAAAG 2461581 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || | || | || | ||||| ||||| Sbjct 2461582 CTGAAGAATCTCAGGCTGAGGCTGCGGCGCTG 2461613 Score = 82.4 bits (90), Expect = 7e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163 ||| || ||||| |||||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 2463810 AGGTGTCTACAAAGCCATGAGTGAGTTCGACATCTTCATCAACTACATAGAAACCTACAT 2463869 Query 129164 GAC 129166 ||| Sbjct 2463870 GAC 2463872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447706783514160