Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq55 131 1e-25 >seq55 Length=12078711 Score = 131 bits (144), Expect = 1e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 127162 GGCTATTTAGGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATG 127221 || ||| | || ||||||||| ||||||||||||| ||||| ||||| |||||||| ||| Sbjct 2461462 GGTTATCTGGGTTGCCAAGCTTTGTCTGAGATGATCCAGTTTTACCTGGAAGAGGTGATG 2461521 Query 127222 CCACAGGCAGAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAG 127281 |||||||| || || || | ||| | ||| ||||| || || || ||||| || |||||| Sbjct 2461522 CCACAGGCTGAGAACCATGAACCAGGCATCAAAGAGCATGTGAACTCCCTAGGAGAAAAG 2461581 Query 127282 CTGAAGACATTGAGACTTCGACTGCGTCGCTG 127313 ||||||| | || || | ||||| ||||| Sbjct 2461582 CTGAAGAATCTCAGGCTGAGGCTGCGGCGCTG 2461613 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 ||||||| || | ||| || ||||| |||||||||||||| ||||| ||||||||||||| Sbjct 2463797 AGCTTCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTCGACATCTTCATCAACTACA 2463856 Query 127439 TCGAGACTTACATG 127452 | || || |||||| Sbjct 2463857 TAGAAACCTACATG 2463870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430013554642616