Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq158 96.9 3e-15 seq25 87.8 2e-12 >seq158 Length=4245986 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAG-CCAATTGTCGCTC 48570 |||||||| | |||||| ||| |||||||||||||||||| |||| | || | || | | Sbjct 3727838 CTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTC-C 3727780 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 || ||||| ||||| || | |||| | | |||||||| || | | |||||| Sbjct 3727779 ATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 3727720 Query 48631 GTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTAT 48690 ||| || || ||| | | |||| ||||| | | || ||||| || || Sbjct 3727719 ATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 3727660 Query 48691 GGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || || ||||| ||||| ||||||||||||||| Sbjct 3727659 GGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATC 3727623 >seq25 Length=21972308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | |||||||| | |||||| ||| |||||||||||||||||| |||| Sbjct 20948577 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 20948518 Query 48559 CAA---TTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCAC 48615 ||| |||| | || ||||| ||||| || | |||| | | |||||||| Sbjct 20948517 CAAAGTATGTC---CATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGG 20948461 Query 48616 CGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTC 48675 || | | |||||| ||| || || ||| | |||| ||||| | | || Sbjct 20948460 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTC 20948401 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 ||| | || ||||| || || ||||| ||||| ||||||||||||||| || Sbjct 20948400 AACCTCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTTG 20948346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421211190745793