Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 4e-15 >seq18 Length=28711273 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 ||| ||||||||| | ||||| || ||||| ||||||| || || || ||||| || | Sbjct 18704865 AGGTTGTAAACATGTTAAAGGCATCCTATTATATGGACCCCCAGGCTGTGGTAAGACTCT 18704924 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGG 164618 |||||||| |||| |||| | || ||| | || || ||| | || ||||| Sbjct 18704925 CTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAATGG 18704981 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || ||| | | ||||||||||| || || ||||||||||| || | || | ||| Sbjct 18704982 GCCAGAAATCCTTAACAAATATGTGGGCGAATCAGAAGCTAACATTCGTAAACTCTTTGC 18705041 Query 164679 GGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| ||||||| || Sbjct 18705042 TGATGCTGAAGAGGAACAAAGGA 18705064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595813954618800