Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq55 116 4e-21 >seq55 Length=12078711 Score = 116 bits (128), Expect = 4e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| || ||||| || || || ||||||| |||||||||||||||||||| || || | Sbjct 2461460 AGGGTTATCTGGGTTGCCAAGCTTTGTCTGAGATGATCCAGTTTTACCTGGAAGAGGTGA 2461519 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 ||||||||||||| || || || || | ||||||||| |||||||| || || || | Sbjct 2461520 TGCCACAGGCTGAGAACCATGAACCAGGCATCAAAGAGCATGTGAACTCCCTAGGAGAAA 2461579 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || |||| || ||||| Sbjct 2461580 AGCTGAAGAATCTCAGGCT 2461598 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || ||||| |||||||||||||||||||| || ||||| || || ||||| | Sbjct 2463797 AGCTTCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTCGACATCTTCATCAACTACA 2463856 Query 10419 TAGAAGCATACATGACCATGAAAAT 10443 ||||| | |||||||| | ||| || Sbjct 2463857 TAGAAACCTACATGACAAGGAAGAT 2463881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547325878423680