Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq16 152 7e-32 seq14 125 1e-23 >seq16 Length=30363061 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 9631 GTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCAC 9690 |||||||| |||| |||||| |||||||||||| || | || || || |||||| Sbjct 7416420 GTGGTCTGGAACAACCTCTCGTCATCCCATTCTGGATGCTCCTGCTTAAGCACGTCGCAC 7416361 Query 9691 ACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCA 9750 |||||||| ||||||| |||||||| || ||||||||||| ||||| |||||||| || Sbjct 7416360 ACTCTGTTATGTTCCCGAAGCCAGATTGTGGCGTACATCATCAGACCGGGCACCAGACCG 7416301 Query 9751 AAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATG 9810 || |||| || || ||||| | || | ||| || || | || || |||||||| Sbjct 7416300 AAGACCTCGTGCCCCACAGCAAACTTCAGGTGTTCAGGGACGTGAGGGGGGTAGATCATC 7416241 Query 9811 TGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCT 9862 | | || ||||||||| | ||| ||||||| ||| || ||||| |||| Sbjct 7416240 TCTGCTTGAGTATCTTTGACTGTGGGAGGATACACTTCTCCATCAATTATCT 7416189 Score = 138 bits (152), Expect = 2e-27 Identities = 213/304 (70%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 8672 GGAACTCGGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATA 8731 ||||| ||| | || || ||||| || || || || | |||| |||||||| || Sbjct 7418310 GGAACGTTGAATGAGGTAAAGGGACAGCCCTTCACATTATTGCAGATGAGAGACTGAATT 7418251 Query 8732 GTTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAA 8791 | ||| | |||| ||| ||| || || ||||| || || ||||| || |||||||| Sbjct 7418250 GAGGCAGTGTTGATGATTTTAAAACCTACTTCTCCACCAAAAGTGCTCGGCTTCCAGTAG 7418191 Query 8792 CCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCG 8851 | || || || || | || |||| || ||||| | ||| || || || || | || Sbjct 7418190 TCAGGAGAACATATAGCATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCAACTTCC 7418131 Query 8852 AGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTAC 8911 | ||| |||| || |||||||| | ||||| ||||||||||||| | | | || Sbjct 7418130 ACCATGGTCTCCCCAAAGATGGCATCCGGACGAGGCTTTTCCACCAGAAGGGCAGGATAA 7418071 Query 8912 AACTCCACAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCT 8971 ||||||| ||| || | ||| || || ||||| || || ||||| |||||||| ||| Sbjct 7418070 AACTCCATAGCATCAACGTCACCATAGAGGGCTTCCAGCTCTGCAGCCATTTCCTTCTCT 7418011 Query 8972 CCTG 8975 |||| Sbjct 7418010 CCTG 7418007 Score = 134 bits (148), Expect = 2e-26 Identities = 125/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 |||||||||||| || || ||||| ||||| || || ||||| || | ||| ||| | || Sbjct 7415339 TCTTACCCCATGGCCTAGCCCTTTGGTGAAAGCTGGTCCTCGTGCAATATCTGTCTTGAA 7415280 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 ||| || || || ||||| ||| |||| || |||||||| || || |||||||||||||| Sbjct 7415279 AAATTGATGGGTAAAATGCTGGGCAAAGAACGCAAACATCAAATTTGTGCCCTGGGGATC 7415220 Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAAC 10186 ||| |||| | || | |||||| |||||||||||| Sbjct 7415219 GGGGATGAACTTTCTTCTTAGAAGAAGTTTTTCCACAAC 7415181 Score = 105 bits (116), Expect = 9e-18 Identities = 188/267 (70%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | ||||| |||||||| ||||| ||||| || | |||||| | || || | Sbjct 7416994 CTTACCCTTCCAGCAATTTGTTTGGTGAATGATTCAACAAACTGGGTCAGTCCATGTTCC 7416935 Query 9382 ATGAGTATGGAATTGTTGTAAACGAA--GTTAATGTAGTCATACTTTGTTTT-ATCAATC 9438 | | ||| || |||||||| | || ||| || ||| || || ||| | |||||| Sbjct 7416934 AGTAATATAGAGTTGTTGTAGATAAACTGTTGAT--AGTTGTA-TTGGTTGTCATCAATT 7416878 Query 9439 TCAAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATA 9498 | || | ||||||| || | |||||||||||| | |||||||||| | | ||| Sbjct 7416877 TGAACGGTGTCCGGCAGAAGGGGATGCCAGTGATAGAGTGTGTTAAACTCAGCAGCGATA 7416818 Query 9499 CGATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAA 9557 || |||||||||||||| | | ||| ||||| || || | |||| || | || Sbjct 7416817 CGGTTTTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTGAA 7416759 Query 9558 GTGGTAGCCGCTGAGCTGCTGAACATA 9584 ||| ||||| || || ||||| ||||| Sbjct 7416758 GTGATAGCCACTCAGGTGCTGTACATA 7416732 >seq14 Length=31380117 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798 ||||||| || ||| |||| || || || || ||||| || |||||||| | || | Sbjct 25348659 TCTTGACAATGTTAAAGCCCATCTCGCCACCAAATGTGCTCGGCTTCCAGTACTCTGGAG 25348600 Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858 | |||||| ||| | | ||| |||||||||||||| || ||||| | ||||| || | Sbjct 25348599 AACAGATGGGGTTTCCTAGGAGACCTTTGAGGGAAAAGGGTGCCCCAATCTCGATCATAC 25348540 Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918 |||| || ||||| | ||| || || |||||||| || | || | ||| ||||| | Sbjct 25348539 TCTCCCCAAAGATAGAGTTCGGTAGGCACTTTTCCAGCAGCAGCCCTGGGTAGAACTCTA 25348480 Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || ||||||||||| || || || || || || || | ||||| ||||||| Sbjct 25348479 AGGCGTCGATGTCTCCATAGAGCTCCTCCAGCTCCGCTGCCACCTCCTTCTCTCCTG 25348423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708455780827920