Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 9e-16 seq158 95.1 1e-14 seq46 89.7 5e-13 >seq25 Length=21972308 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94796 AACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCC 94855 ||||| | || | ||| || |||||||| | ||| || || || ||| | ||| Sbjct 20948561 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCT 20948502 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 ||||| || || || |||| || | |||||||||||| |||||||| ||||| || || Sbjct 20948501 TCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 20948442 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || ||||| || | | || || | | | || || |||| |||||||| Sbjct 20948441 TGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTC 20948382 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| ||||| |||||||| Sbjct 20948381 TTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq158 Length=4245986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94796 AACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCC 94855 ||||| | || | ||| || |||||||| | ||| || || || ||| | ||| Sbjct 3727835 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTCCATCT 3727776 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 ||||| || || || |||| || | |||||||||||| |||||||| ||||| || || Sbjct 3727775 TCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 3727716 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || ||||| || | | || || | | | || || || | |||||||| Sbjct 3727715 TGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTC 3727656 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| ||||| |||||||| Sbjct 3727655 TTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 3727624 >seq46 Length=13992998 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| |||| ||| | || || || || || | ||| || || Sbjct 3038133 CCACCCCTCAGGCGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 3038074 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| |||||||||||| || || ||||||| | || ||||| || ||||| Sbjct 3038073 AGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 3038014 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||||||| || | || || ||||| || | | |||||| | | || || Sbjct 3038013 ATCCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 3037954 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || ||||| || ||||| ||||| Sbjct 3037953 TCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCAT 3037907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448247530833480