Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq118 170 2e-37 seq126 156 4e-33 seq22 96.9 4e-15 seq36 93.3 4e-14 seq495 87.8 2e-12 seq339 84.2 2e-11 >seq118 Length=6727830 Score = 170 bits (188), Expect = 2e-37 Identities = 364/539 (68%), Gaps = 6/539 (1%) Strand=Plus/Plus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 || ||||||| |||| || | ||| ||||||||| ||| || |||||| | | | Sbjct 3435539 TTAAAAAATCTGCATTCAAGGTGAAGACATTATCTATGGTTTCTGCCATAATAGCAAAAT 3435598 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 ||| || || || || ||| || || ||||| || ||||||| ||| || ||| || Sbjct 3435599 GTTGGTACTCTGAAATTCATTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTT 3435658 Query 21246 CCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAA-CCCAGTTCTGATAAT 21304 ||||||||||||| |||||||| | | || | || | | || || |||||| | | Sbjct 3435659 CCATAAAATCAAAGGGATTTTCTGCCTGGAAAACCTT-TGAGAATCCAAGTTCTACAAGT 3435717 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 ||||| | || ||||| || |||| || ||| || ||||||||| || | | Sbjct 3435718 AATCTGTTAGCCACAAACTCAGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGG 3435777 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424 || || | ||||| ||| ||||| | || || ||| || |||| ||| || Sbjct 3435778 ACAACTGGTAAAGCTTCTGTTAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATC 3435837 Query 21425 TTTATTATCCTAGATGTACT--AGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 | | | || | | || ||| || | || | | ||| |||| | |||| Sbjct 3435838 TCCCTGA--CTCTCTCTTCTGAAGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAA 3435895 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 | ||||| |||| ||||||||| || || || | |||||| ||||| || | || | || Sbjct 3435896 AGTCACAGTGCAGACCTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACA 3435955 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 | | ||||||| |||| | | ||||| | ||||| | |||||| |||||||| | | Sbjct 3435956 TAAGAACTCTCTTCTTTAGCTAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTT 3436015 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCAT 21661 | || |||||||| || || | || ||| || | ||||||| | |||| ||||||| Sbjct 3436016 CTACAGCAGCAAAGGCCACCACTCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCAT 3436074 >seq126 Length=6050536 Score = 156 bits (172), Expect = 4e-33 Identities = 317/475 (67%), Gaps = 10/475 (2%) Strand=Plus/Plus Query 21461 TGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCA 21520 ||||| | ||||| || ||||| ||||| || ||||| ||||| || || || | |||| Sbjct 4678564 TGTTTGAGCATCAGTCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 4678623 Query 21521 TTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAAT 21580 || |||||||| || ||||| | ||||| || || | ||| |||||||| ||||| Sbjct 4678624 TTGGAAAATGTGGG-CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAA 4678682 Query 21581 GCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTA 21640 | || ||||| || || || || || || ||||| || || | ||||| || || ||| Sbjct 4678683 GAACCAGAAAAAAAGATTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTA 4678742 Query 21641 GATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATT 21700 | ||||| ||| ||||| |||| |||||| | || | |||| ||| Sbjct 4678743 GCCTCTTTGTCCCCAATCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATT 4678802 Query 21701 GTATCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNN 21760 | |||||||| || || ||| | |||| | ||| | ||| Sbjct 4678803 ATTTCAATAGCATTGAAGAGAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATA 4678862 Query 21761 NNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGA-AAT--------CCG 21811 |||||||||||||||||| || ||||| || || || || ||| | Sbjct 4678863 AGGAGACTATACATTTCAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTA 4678922 Query 21812 TAAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCA 21871 || ||||| | ||||||| | ||||| || |||||||| ||||||||||| Sbjct 4678923 TAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCA 4678982 Query 21872 TTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATC 21926 |||||||| |||||||| || || ||||| |||| | || | ||| || |||| Sbjct 4678983 TTTACTATGCCATCACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATC 4679037 >seq22 Length=23169006 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181 || ||||| || |||||||| || | ||| ||| ||| | ||||||| | |||| Sbjct 2788381 TTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCC 2788322 Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241 || | ||||| || | ||||| || || || || || ||||||||||||| ||| ||| Sbjct 2788321 ATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATA 2788262 Query 21242 GATTCCATAAAATCAAATGGATTTTC 21267 |||||||| |||||||||||||| Sbjct 2788261 TTCTCCATAAAGTCAAATGGATTTTC 2788236 >seq36 Length=16585812 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181 || ||||| || |||||||| || | ||| ||| ||| | ||||||| | || | Sbjct 11366884 TTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCTC 11366943 Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241 || | ||||| || | ||||| || || || || || ||||||||||||| || ||| Sbjct 11366944 ATCCTCTGATATTCCCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGGGAAATA 11367003 Query 21242 GATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGT 21295 |||||||| |||||||||||||| | | || | || || ||||||||| Sbjct 11367004 TTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGTTGCAACCCAGT 11367057 >seq495 Length=45594 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 130665 GTTTCAACTTTAACAAGAGTTGCTCCCAATGAAGTACAAAATGTGTTGCCAAATGTCCAA 130724 |||| || || | |||| | ||| | || || | ||| || || | | || |||||| Sbjct 32804 GTTTGAAATTGAGCAAGGTTGGCTTCTAAGGAGGCACAGAAGGTTTGACTGAACGTCCAA 32745 Query 130725 TTTTTTGAATCTTCAGAAAAGTAAAAGCATTTATATCCAAATCCAATCCATCCCTTTGGG 130784 || ||| ||||||||||| ||||| |||||| |||||||||||||||| |||||| Sbjct 32744 TTCCTTGTGTCTTCAGAAAAATAAAAACATTTACTTCCAAATCCAATCCATTTTTTTGGG 32685 Query 130785 CAAGTAACATA 130795 || | |||||| Sbjct 32684 CAGGCAACATA 32674 >seq339 Length=348666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 130665 GTTTCAACTTTAACAAGAGTTGCTCCCAATGAAGTACAAAATGTGTTGCCAAATGTCCAA 130724 ||||||| || | |||| | | | | || || | ||| || || | | ||||||||| Sbjct 11791 GTTTCAAATTGAGCAAGGTTGGATTCTAAGGAGGCACAGAAGGTTTGACTGAATGTCCAA 11850 Query 130725 TTTTTTGAATCTTCAGAAAAGTAAAAGCATTTATATCCAAATCCAATCCATCCCTTTGGG 130784 || ||| ||||||||||| | ||| ||||||| ||||||||||||||| | || ||| Sbjct 11851 TTCCTTGTGTCTTCAGAAAAATGAAAACATTTATTTCCAAATCCAATCCAGCTTTTCGGG 11910 Query 130785 CAAGTAACATA 130795 || | | |||| Sbjct 11911 CAGGCAGCATA 11921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531848986213320