Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq126 347 2e-90 seq118 196 6e-45 seq22 123 3e-23 seq4 111 2e-19 seq1 111 2e-19 >seq126 Length=6050536 Score = 347 bits (384), Expect = 2e-90 Identities = 648/945 (69%), Gaps = 20/945 (2%) Strand=Plus/Plus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 4678229 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 4678288 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || |||| || || | || || || || ||||| ||||| |||| ||| |||| | Sbjct 4678289 TCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCT 4678348 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||||||||| || | ||| || | || |||| ||| || | Sbjct 4678349 CCATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGCATAA 4678408 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 | | ||||| || || || || | ||||| | | | | ||| || || || | Sbjct 4678409 GTGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCT 4678468 Query 33194 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 33253 | | || | ||| |||| || || || ||| | | || ||| || || || Sbjct 4678469 TCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTATTT 4678528 Query 33254 ATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 33313 | | || | | || |||| || | ||||| | ||||| || || || | Sbjct 4678529 CTTTTACTCTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAGT 4678588 Query 33314 CGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTA 33373 | ||||| | |||||| ||||| ||||| ||||| |||||||| ||| | || ||||| | Sbjct 4678589 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCATCA 4678647 Query 33374 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTA 33433 | || || || || ||||| ||||| || || || || |||||||| ||||||||||| | Sbjct 4678648 GTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCCA 4678707 Query 33434 CTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTT 33490 |||| |||||||| | || | |||||||| | | | |||| ||||| Sbjct 4678708 CTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCA 4678767 Query 33491 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 33550 |||| | | |||||||| || |||||| |||| |||| || ||||| |||||| | | Sbjct 4678768 AGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAAATT 4678827 Query 33551 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33610 |||| | |||||||| ||||| || || | |||||||||||||| ||||||| Sbjct 4678828 CCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAA 4678887 Query 33611 TGTTTTCAATGGCCATCT-GAAAT--------CCGTAGAAACATCTAGCCTCGGTAATCT 33661 ||||||| ||||| || | | ||| | |||||||| | ||||| ||||||| Sbjct 4678888 TGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAATCT 4678947 Query 33662 GTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 33721 | |||||| | |||||||||| |||| |||||||| ||||| || ||||| ||||| | Sbjct 4678948 GAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCGA 4679007 Query 33722 AAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT--AGTTTATTCCAATC 33779 |||| |||| |||||| ||| || ||| | || | ||| || || || ||| | Sbjct 4679008 AAAAAGCCAGAACATGTGATATGAAGTATCTCTC-TTTGGGCTTCAAGGTT-GCCCAGTG 4679065 Query 33780 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33839 | || || ||||| | ||| || || || | ||||| || || |||| || || || Sbjct 4679066 CTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGCTTTCTT 4679125 Query 33840 ATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 |||||| | ||| ||||||| |||| ||| || || || ||||| Sbjct 4679126 ATACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 196 bits (216), Expect = 6e-45 Identities = 556/855 (65%), Gaps = 32/855 (4%) Strand=Plus/Plus Query 33033 TTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 33092 ||| || || ||||| |||||||||| ||| || ||||||||||| |||||||| ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 33093 GGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTC 33152 | | ||| ||| ||||| | ||| || ||||| | || || || || Sbjct 3435678 TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTC 3435737 Query 33153 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT 33212 |||| | |||||| |||||||||||| | || |||||| | ||| | || Sbjct 3435738 AGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGT 3435797 Query 33213 AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACT 33272 | ||| || || ||||| || || || | || || || || | ||||| Sbjct 3435798 TAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTGA 3435857 Query 33273 CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTC 33332 || || | || | | ||| |||| | || || || ||||||||||| || || Sbjct 3435858 AGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATC 3435917 Query 33333 TCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 33392 ||| || || ||||| |||||||| |||||||| | ||| || | | ||| || ||| | Sbjct 3435918 TCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTA 3435977 Query 33393 AAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452 ||||| | ||| || ||||| || ||||| |||| |||||| ||||||||||| | | Sbjct 3435978 GAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCAC 3436037 Query 33453 TCTCTCTCCATAACCGGCGCTGTCAT-----GTATCCACTTTTGAGCCCAATCGGCCTTC 33507 ||| || || || | | | | || |||||| | |||||| || || Sbjct 3436038 TCTTTCCCCCAAA--GTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTT 3436095 Query 33508 TTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCT 33567 || | ||||| ||||| ||||| || ||||||| | | | | ||| || ||| Sbjct 3436096 TTCTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATC- 3436154 Query 33568 TTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATC 33627 | | ||||| || | | | ||| ||||| || || |||| || || ||| || Sbjct 3436155 -TGATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAGAATT 3436213 Query 33628 TGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCC 33687 || ||| |||| | || ||| || || || | | || Sbjct 3436214 TG--------TGAA--------CCTCTGGAACCTGCACCTCCTGAC-------TGACACC 3436250 Query 33688 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33747 | |||||||| | ||||| ||||||||||||||||| || || | || | || Sbjct 3436251 ACGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAA 3436310 Query 33748 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 33807 ||||| || |||| | | || || ||||| | | || |||||| |||| || || ||| Sbjct 3436311 TATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTCT 3436370 Query 33808 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGG 33867 || ||||||| || ||||| | | ||| ||| || | ||||| | ||| || ||| Sbjct 3436371 TCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTGG 3436430 Query 33868 ATTGGGAAAATAACA 33882 |||| || || ||| Sbjct 3436431 ATTGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || |||||||||||||||||||| ||||| ||||||| Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 33446 C 33446 | Sbjct 2785786 C 2785786 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| ||||| || || | |||||||||||||| |||||||||||||| ||||| Sbjct 2782831 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGC 2782772 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || || |||||||| | ||||| |||||||| |||||| | |||||| || Sbjct 2782771 AATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 2782712 Query 33684 CGCC 33687 | || Sbjct 2782711 CACC 2782708 >seq4 Length=47749213 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| ||||| || ||||| || || | ||| || Sbjct 24674282 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 24674223 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| ||||| | ||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 24674222 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 24674164 >seq1 Length=73491278 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 31008377 TCCAGCCGTAGAAGTGCATACTAGTCAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 31008318 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || |||||||| || || || || || || || |||||| | | || || | Sbjct 31008317 TCAAAGACTGGCTTTGATCAATAAAAGCACCTCTCTCGGCTGCCATTGTGAGGACAGTTT 31008258 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | ||||||||| | ||||||||||| |||| | || || |||| Sbjct 31008257 TCTGAGAAATTTCCCATACAGTTTTATAAAGCTGCTTCAGGTCATCAGGAA 31008207 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | Sbjct 31005464 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 31005405 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 || |||||||| |||| || ||||| ||||| || || ||||| || || | | |||| Sbjct 31005404 GATTCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAA 31005345 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 31005344 CTGTTTCTTATACCATA 31005328 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 30995012 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 30994953 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| || ||| | | || || | |||||| Sbjct 30994952 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCA 30994893 Query 63332 CGGTTCCAAGTATATGGC 63349 || |||||||| || || Sbjct 30994892 AGGCTCCAAGTAGATAGC 30994875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622886517155880