Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq223 113 1e-19 seq1 100 7e-16 seq22 87.8 5e-12 >seq223 Length=2232465 Score = 113 bits (124), Expect = 1e-19 Identities = 371/569 (65%), Gaps = 12/569 (2%) Strand=Plus/Plus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 |||||||| || ||||| || | | |||||||| || | || || | |||||| Sbjct 1612436 TTTCCACTGCTGACAACCAAATGTGTGTTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGG 1612495 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 ||||| ||| ||||| || || || || | | ||| || ||||| |||||| Sbjct 1612496 TTTATCAAGGGATCCACAAAAGCTAAAGAGCTATCTTCCAAAGGAGTGAAAATCTGGGAT 1612555 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGT-TGGTCTTGTCGACAAC-GAAGAAGGTG 111492 | |||||| || |||||| | ||| || ||| || || | || |||||||||| Sbjct 1612556 GCCAATGGACACCGAGACTTTTTGGAT--AGCCTGGGATTATCCAAAAGAGAAGAAGGTG 1612613 Query 111493 ATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGC 111552 | | || | |||||| || || || ||| | || ||||| ||||| |||||| ||| Sbjct 1612614 ACTTTGGCCTAGTTTATGGCTTCCAGTGGAGGCATTTTGGAGCAGAATACAAAGATATG- 1612672 Query 111553 ACGACTCATATGATTCA---CAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTA 111609 || ||| || ||||| || || | | | ||||| ||||| || |||||| || | Sbjct 1612673 --GATTCAGATTATTCAGGTCAAGG-AGTTACCAATTGCAGAAAGTGATTGATACCATCA 1612729 Query 111610 AGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAA 111669 | | |||||| | | | || || ||| |||| ||||||||||| | | Sbjct 1612730 AAACCAACCCTGATGACAGAAGAATCATCATGCGTGCTTGGAACCCAAAAGATCTTCCTC 1612789 Query 111670 AAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTT 111729 ||| |||| || || || ||| | |||||||| || || |||| || Sbjct 1612790 TGATGACACTACCTCCGTGCCATGCCTTCTGCCAGTTCTACGTGGTGAACGGTGAACTGA 1612849 Query 111730 CATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAA 111789 | |||| |||| |||| || | || | || || ||||| ||||| || ||||| | Sbjct 1612850 C-CGCCAGCTGTACCAGCAGTCAGGAGACACGGGCCTGGGTGTGCCGTTCAACATTGCCA 1612908 Query 111790 GTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCA 111849 | ||| | || || || | | ||| | || | || ||| || || ||||| || Sbjct 1612909 GCTACTCCCTGCTCACGTACAAGATCACGCACATCACTGGTCTGAAGCCAGGTGACTTTG 1612968 Query 111850 TTCACGTTATCGGAGATGCGCATGTTTAC 111878 | || | | |||||||| ||| ||||| Sbjct 1612969 TACATACTTTGGGAGATGCACATATTTAC 1612997 >seq1 Length=73491278 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| ||||||||||| || || ||| Sbjct 30997045 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGAACCCCATACATG 30997104 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||||||||| || || || || |||||||||| |||| || || || | Sbjct 30997105 CTGTACAAAGATTCTTGTAATCGGAAAAGCAACCAGCAGAACCTGGGAACCATCAAATGC 30997164 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || | | ||||| ||| Sbjct 30997165 AGCAACCTGTGCACAGAAGTAGTAGAATATACC 30997197 Score = 95.1 bits (104), Expect = 3e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 ||||| |||||||| || | |||||| ||||| || || |||||||||||||| | Sbjct 30994866 GGGGCCTTTGCTATCTACTTGGAGCCTTGGCATGCAGACATCTTTGAGTTTCTTGATTTA 30994925 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| || Sbjct 30994926 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGGGACCTTTTCTTTGCCCTTTGGATT 30994985 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984 | || | || ||||| || |||||| Sbjct 30994986 CCAGATCTCTTCATGAAACGAGTGGAG 30995012 Score = 91.5 bits (100), Expect = 4e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011 ||| ||| || | | |||| || || ||||||| |||| ||||| ||||||||||||| Sbjct 31008192 AGAGCATACCTGAAATTCCTGATGACCTGAAGCAGCTTTATAAAACTGTATGGGAAATTT 31008251 Query 365012 CCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGT 365071 | | |||| || | ||||| ||||| | ||||||||||| ||| ||||||| Sbjct 31008252 CTCAGAAAACTGTCCTCACAATGGCAGCCGAGAGAGGTGCTTTTATTGATCAAAGCCAGT 31008311 Query 365072 CGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACG 365131 | || ||| | || || |||| | || | ||| || || ||||| ||||||| Sbjct 31008312 CTTTGAACATCCATATTGCTGAGCCTAACTATGGCAAACTGACTAGTATGCACTTCTACG 31008371 Query 365132 GGTGGAAA 365139 | |||||| Sbjct 31008372 GCTGGAAA 31008379 >seq22 Length=23169006 Score = 87.8 bits (96), Expect = 5e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| || | || ||||| | || ||||| || ||||||||||| | ||| || Sbjct 2785774 GAACGTGTTGTAGCCTTTGCGGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCA 2785833 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || || ||||| || ||||| | | | ||||| || || || ||||| ||||| | ||| Sbjct 2785834 ATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 2785893 Query 22609 AGCCGAGATGAGG 22621 ||| ||||||||| Sbjct 2785894 AGCAGAGATGAGG 2785906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303223462994126