Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq46 109 5e-19 >seq46 Length=13992998 Score = 109 bits (120), Expect = 5e-19 Identities = 169/241 (70%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||||| || | || | ||| ||||| || || |||||||| || Sbjct 3038133 CCACCCCTCAGGCGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 3038074 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||||||||| |||| | | ||||||||| |||||| Sbjct 3038073 AGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 3038014 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || ||| || ||| | | ||| | || || ||| ||| | Sbjct 3038013 ATCCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 3037954 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA---TGACTTATTTT 131244 || | ||| | ||| || || || || ||||||||||| || |||| |||| || ||| Sbjct 3037953 TCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCATTTTGACCTAATTT 3037894 Query 131245 A 131245 | Sbjct 3037893 A 3037893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471966820053120