Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq139 122 6e-23 seq158 100 2e-16 seq102 100 2e-16 seq25 100 2e-16 seq9 100 2e-16 seq212 98.7 7e-16 seq65 93.3 3e-14 seq94 91.5 1e-13 seq26 91.5 1e-13 seq21 91.5 1e-13 >seq139 Length=5252280 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 326532 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 326473 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| |||||||||||||||||||| Sbjct 326472 TCATCCATTCATGCACGTCACTAATTAGATGACGA 326438 >seq158 Length=4245986 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||||| |||||||||||| ||||| ||||||||| | | | || Sbjct 3727835 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTCCATCT 3727776 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||| Sbjct 3727775 TCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 3727716 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || || ||||||||| | | ||||| |||||| || | || || || Sbjct 3727715 TGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTC 3727656 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||| || || |||||||| || Sbjct 3727655 TTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 3727621 >seq102 Length=7754592 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||||| |||||||||||| ||||| ||||||||| |||| | || Sbjct 7635976 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 7635917 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 || | ||| || || ||||| | || | ||| ||||| | || | ||||| || ||| Sbjct 7635916 TCCAGTTGCTTGCCAGCAAAAACGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 7635857 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || || ||||||||| | | ||||| ||||| || | || || || Sbjct 7635856 TGGATCTTGACCTTCACATTTTCTATTGTATCCGAGGGGTCAACCTCGAGAGTGATGGTC 7635797 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||| | | |||||| | ||| |||||||| || Sbjct 7635796 TTCCCCATGAGGGTTTTTATGAACATCTGCATCTT 7635762 >seq25 Length=21972308 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||||| |||||||||||| ||||| ||||||||| | || | || Sbjct 20948561 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCT 20948502 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||| Sbjct 20948501 TCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 20948442 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || || |||||| || | | ||||| |||||| || | || || || Sbjct 20948441 TGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTC 20948382 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||| || || |||||||| || Sbjct 20948381 TTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 20948347 >seq9 Length=38779656 Score = 100 bits (110), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||||| |||||||||||| ||||| ||||||||| || | || Sbjct 2389067 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCAATCT 2389126 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 |||| ||| || || ||||| || || | ||| ||||| | || | |||| || ||| Sbjct 2389127 TCTAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTACTTATCC 2389186 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || || |||||||| | | ||||| |||||| | | ||| || ||| Sbjct 2389187 TGGATCTTGGCTTTCACATTTTCTATCATATCTGAGGGTTCAACCTTGAGTGTGATGGTT 2389246 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || |||| ||| ||||| |||||||| || Sbjct 2389247 TTCCCTGT-AAGGGTTTTACGAAAATCTGCATCTT 2389280 >seq212 Length=2426081 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||||| |||||||||||| |||| || |||| |||| | || Sbjct 1901295 AACACAACATGAAGAGTGGACTCCTTTTGAATGTTGT----AGTCAAAGTACGTCCATCT 1901240 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||| Sbjct 1901239 TCCAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 1901180 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || || ||||||||| | | |||||| |||| | || | || || || Sbjct 1901179 TGGATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTGATGGTC 1901120 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||| ||||| |||||||| || Sbjct 1901119 TTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 1901085 >seq65 Length=11138919 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 38122 TGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGG 38181 || ||||||||||||| | ||| ||||||||| | | | || || | ||| || || | Sbjct 6551985 TGATCTCCTTTTGAATGTGGTAGTCAGACAAAGTATATCCATCTTCCAGTTGCTTGCCAG 6551926 Query 38182 CAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCA 38241 |||| || || | ||| ||||| | || | |||||| || ||| || || ||||| Sbjct 6551925 CAAAAATGAGTCCTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCA 6551866 Query 38242 CATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTT 38301 |||| | | |||||| |||||| || | || || || || | ||| | ||||| Sbjct 6551865 CATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTGATGGTCTTCCTCGTGAGGGTTT 6551806 Query 38302 TCACGAATATCTGCATGTT 38320 | ||||| |||||||| || Sbjct 6551805 TTACGAAAATCTGCATCTT 6551787 >seq94 Length=8087295 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||| | |||||||||||| ||||| ||||||||| || | | || Sbjct 5840512 AACACAACATGAAGAGAGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCT 5840571 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 || | ||| || || | ||| || || | ||| ||||| | || | ||||| || ||| Sbjct 5840572 TCCAGTTGGTTGCCAGGAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 5840631 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 || || ||||||||| | | | ||||| |||||| | | || || ||| Sbjct 5840632 TGGATCTTGGCCTTCACATTTTCTATATTATCTGAGGGTTCAACCTTGAGAGTGATGGTT 5840691 Query 38286 TTACCCGTCAAGGTTTTC 38303 || ||||| | ||||||| Sbjct 5840692 TTCCCCGTGAGGGTTTTC 5840709 >seq26 Length=21254048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 19945 TTCT-CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 |||| |||||||||||||||||||||||||||||| | |||||||||| |||| |||| Sbjct 4475421 TTCTGCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTATGGTACTTGTTGATTATCAGTCT 4475480 Query 20004 CGCGGTAATATTTAGCCTTA 20023 || | | |||||||||||| Sbjct 4475481 CGTGCCAGTATTTAGCCTTA 4475500 >seq21 Length=25602908 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/207 (70%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||||||| |||||||||||| ||||| ||||||| | |||| | || || | ||| Sbjct 20609875 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTACGTCCATCTTCCAGTTGC 20609816 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || ||||| || || | ||| ||||| | || | |||||||| ||| || || Sbjct 20609815 TTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATCTTG 20609756 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT-TTTACCCGT 38293 ||||||||| | | ||||| ||||| || | || || || || ||| | Sbjct 20609755 GCCTTCACATTTTCTATTGTATCCAAGGGTTCAATCTCGAGAGTGATGGTCTTCCCCCAT 20609696 Query 38294 CAAGGTTTTCACGAATATCTGCATGTT 38320 | |||| | || ||||||||||| || Sbjct 20609695 AAGGGTTATTACAAATATCTGCATCTT 20609669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334915387656983