Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq126 327 1e-84 seq118 183 4e-41 seq22 123 3e-23 seq1 111 2e-19 seq4 107 2e-18 >seq126 Length=6050536 Score = 327 bits (362), Expect = 1e-84 Identities = 442/610 (72%), Gaps = 17/610 (3%) Strand=Plus/Plus Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 ||||| | ||||| || || || || ||||||| |||||| ||||| ||||| | ||| Sbjct 4678564 TGTTTGAGCATCAGTCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 4678623 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 |||||||| ||| | || ||||| || || || || || ||||| ||||| || ||||| Sbjct 4678624 TTGGAAAATGTGGG-CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAA 4678682 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 32822 || |||||||| || |||||||| ||||| |||||||| | || | |||||||| | Sbjct 4678683 GAACCAGAAAAAAAGATTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTA 4678742 Query 32823 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882 | | |||| ||||| |||| | | |||||||| || |||||| ||||| Sbjct 4678743 GCCTCTTTGTCCCCAATCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATT 4678802 Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942 | || |||||||| |||||| | | |||| | |||||||| || || ||||| Sbjct 4678803 ATTTCAATAGCATTGAAGAGAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATA 4678862 Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT-GAAAT--------CCG 32993 | |||||||||||||| |||||||||||||| ||||| |||| | ||| | Sbjct 4678863 AGGAGACTATACATTTCAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTA 4678922 Query 32994 TAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCA 33053 ||||| || | ||||| |||||||| |||||| | ||||||||| | || |||||| Sbjct 4678923 TAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCA 4678982 Query 33054 TTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 33113 || ||||| || ||||| ||||| ||||| |||| |||||| ||| || ||| | || Sbjct 4678983 TTTACTATGCCATCACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTC- 4679041 Query 33114 TCTGGTGTT--AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 33171 | ||| || || || ||| | | || || ||||| | |||||| || || | | Sbjct 4679042 TTTGGGCTTCAAGGTT-GCCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCG 4679100 Query 33172 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAA 33231 |||| || || |||| || || |||||||| | ||| |||||||| |||| || |||| Sbjct 4679101 TCCACAAAGACACCTCCGCTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAA 4679160 Query 33232 AAATAACAAA 33241 | || ||||| Sbjct 4679161 AGATGACAAA 4679170 >seq118 Length=6727830 Score = 183 bits (202), Expect = 4e-41 Identities = 553/855 (65%), Gaps = 32/855 (4%) Strand=Plus/Plus Query 32390 TTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATT 32449 ||| || || ||||| ||||| |||| || || ||||||||||| ||||| || ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 32450 GGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTC 32509 | | ||| ||| ||||| | ||| || ||||| | || ||||| || Sbjct 3435678 TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTC 3435737 Query 32510 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT 32569 |||| | |||||| |||||||||||| | || |||||| | ||| | || Sbjct 3435738 AGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGT 3435797 Query 32570 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACT 32629 | ||| || || ||||| ||| || || | || || || ||| | ||||| Sbjct 3435798 TAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTGA 3435857 Query 32630 CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTC 32689 || || | || | | ||| |||| | || || || ||||| ||||| || || Sbjct 3435858 AGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATC 3435917 Query 32690 TCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 32749 ||| || || | ||| |||||||| |||||||| | ||| || | | ||| || ||| | Sbjct 3435918 TCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTA 3435977 Query 32750 AAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 32809 ||||| | ||||| ||||| || |||||||||| |||||| || |||||||| | | Sbjct 3435978 GAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCAC 3436037 Query 32810 TCTCTCTCCATAACCGGCGCTGTCAT-----GTATCCACTTTTGAGCCCAATCGGCCTTC 32864 ||| || || || | | | | || |||||| | |||||| || || Sbjct 3436038 TCTTTCCCCCAAA--GTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTT 3436095 Query 32865 TTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCT 32924 || | ||||| |||||||| || || ||||||| | | | | ||| || ||| Sbjct 3436096 TTCTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATC- 3436154 Query 32925 TTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATT 32984 | | || || || | | | ||| ||||| || || |||| || || ||| ||| Sbjct 3436155 -TGATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAGAATT 3436213 Query 32985 TGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCT 33044 || ||| |||| | || ||| || || || | | Sbjct 3436214 TG--------TGAA--------CCTCTGGAACCTGCACCTCCTGAC-------TGACACC 3436250 Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 | |||||||| | ||||| ||||||||||||||||| || || | || | || Sbjct 3436251 ACGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAA 3436310 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 ||||| || |||| | | || || ||||| | | || |||||| |||| || || ||| Sbjct 3436311 TATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTCT 3436370 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 33224 || ||||||| || ||||| | | ||| ||| || | ||||| | ||| | || || Sbjct 3436371 TCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTGG 3436430 Query 33225 ATTGGAAAAATAACA 33239 |||| ||| || ||| Sbjct 3436431 ATTGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||||||||||| Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 32803 C 32803 | Sbjct 2785786 C 2785786 Score = 109 bits (120), Expect = 7e-19 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || || ||||| | |||||||||||||| |||||||||||||| ||||| Sbjct 2782831 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGC 2782772 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||| || || ||||| || | ||||| |||||||| |||||| | |||||| || Sbjct 2782771 AATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 2782712 >seq1 Length=73491278 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| |||| ||| |||||||||||||| | || || || || || || || || | | Sbjct 30965877 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAAGA 30965818 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 30965817 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 30965758 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||||||||| || || ||| |||||| |||||||| || ||||| Sbjct 30965757 GTTCTACCGTGGTGACCCCACTATATAAGCCTTGGATTACTTTCAT 30965712 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | Sbjct 31005464 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 31005405 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 || |||||||| |||| || ||||| ||||| || || ||||| || || | | |||| Sbjct 31005404 GATTCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAA 31005345 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 31005344 CTGTTTCTTATACCATA 31005328 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 31008377 TCCAGCCGTAGAAGTGCATACTAGTCAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 31008318 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || |||||||| || || || || || || || |||||| | | | || | Sbjct 31008317 TCAAAGACTGGCTTTGATCAATAAAAGCACCTCTCTCGGCTGCCATTGTGAGGACAGTTT 31008258 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | ||||||||| | ||||||||||| |||| | || || |||| Sbjct 31008257 TCTGAGAAATTTCCCATACAGTTTTATAAAGCTGCTTCAGGTCATCAGGAA 31008207 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 30995012 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 30994953 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 ||||| || |||||||| ||||| || | ||| || ||| | | || || | |||||| Sbjct 30994952 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCA 30994893 Query 63187 CGGTTCCAAGTATATGGC 63204 || |||||||| || || Sbjct 30994892 AGGCTCCAAGTAGATAGC 30994875 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 ||||| | ||| | || | || || ||||| || | || |||||||| ||||||||| Sbjct 30976484 CTAGAAAGTTGTGGGCGGTTGGTGCCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAAC 30976425 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 || | |||||||| || || || || ||||| || | || || || ||| ||||| Sbjct 30976424 CACCTCTCAGAAAGAAGGTTATATGTTTCAATTGCAGCATCAATGTCTTCTTGGTGAATC 30976365 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 ||||| | ||| | ||| ||||| ||||| ||||||||| Sbjct 30976364 CCTACAGAGACCCTCATCAACATATGCTGCGGTCTTTCA 30976326 >seq4 Length=47749213 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || || | ||| |||||||| ||||| || ||||| || || | ||| || Sbjct 24674282 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 24674223 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 24674222 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 24674164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633570276322800