Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq96 114 1e-20 seq25 102 7e-17 seq158 95.1 1e-14 seq63 95.1 1e-14 seq212 91.5 1e-13 seq6 89.7 4e-13 seq9 87.8 2e-12 >seq96 Length=8018273 Score = 114 bits (126), Expect = 1e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 22264 GAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGT 22323 || || ||| ||| || ||| | || || ||||| ||||| ||||| |||||||| Sbjct 7717114 GAGGTCGAACCCAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGC 7717055 Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 |||||||| || || || ||||| |||||||| ||||||||| | |||||| |||||| Sbjct 7717054 ATTCCACCTGACCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAGGATGGCCGCACT 7716995 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 | || ||||||||||| || ||| | || ||| Sbjct 7716994 CTTTCAGATTACAACATCCAGAAATAGTCTACC 7716962 >seq25 Length=21972308 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| | || || || || |||||||||| || ||| || Sbjct 20948347 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCC 20948406 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || | | || || || || || ||||| || ||||| || ||| Sbjct 20948407 TCGGATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 20948466 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || | || ||| | || | || || ||| Sbjct 20948467 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTAC 20948526 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| || ||||| | ||| | || || || | || || ||| Sbjct 20948527 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACTTCGTGGTGGT 20948577 >seq158 Length=4245986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| | || || || || ||||||| || || ||| || Sbjct 3727621 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCC 3727680 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 3727681 TCGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3727740 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || | || ||| || | || || ||| Sbjct 3727741 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGAGATACTTTGTCTGACTAC 3727800 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||||||||| || ||||| Sbjct 3727801 AACATTCAAAAGGAGTCCAC 3727820 >seq63 Length=11284890 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || || ||||| || || ||| Sbjct 6709451 GATGCAGATCTTTGTGAACACCCTGACAGGCAAGACCATCTGCCTTGAGGTTGAGCCCAG 6709510 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | | || ||||| ||||| ||||| |||||||| |||||| || || Sbjct 6709511 TGACACCATCAAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCATATGACCA 6709570 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || |||| |||||||| || ||||| | ||| || || ||| | || |||||||| Sbjct 6709571 GCAGTGTCTGATATTTGCAGGTAAACAACTCGAGTATGGCCACACTCTTTCAGATTACAA 6709630 Query 22398 CATTCAAAAAGA 22409 |||||| ||||| Sbjct 6709631 CATTCAGAAAGA 6709642 >seq212 Length=2426081 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | || || || || |||||||||| | ||| || Sbjct 1901085 AAGATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCC 1901144 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 1901145 TCAGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1901204 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || | || ||| || || | || ||| Sbjct 1901205 CAGCAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 1901260 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| || ||||| | ||| | || || || | |||| ||| Sbjct 1901261 AACATTCAAAAGGAGTCCACTCTTCATGTTGTGTTAAGACTTTGCGGTGGT 1901311 >seq6 Length=46294980 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/198 (70%), Gaps = 18/198 (9%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 41518142 AGATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCA 41518201 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAAT-TCAA-GACAAGGAGGGTATTCCACCCGA 22334 || ||| ||| ||||| |||| | ||| |||| |||||||| || Sbjct 41518202 GTGACACC--------------ACAGAAAATGTCAAAGCCAA--AGGGCATTCCACCTGA 41518245 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || |||| |||||||| ||||||||||| || ||| || ||| | || ||||| Sbjct 41518246 CCAGCAGTGTCTGATATTTGCAGGCAAACAGTTCGAAGATGGCCACACTCTTTCAGATTA 41518305 Query 22395 CAACATTCAAAAAGAATC 22412 |||||| || |||||||| Sbjct 41518306 CAACATCCAGAAAGAATC 41518323 >seq9 Length=38779656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/200 (70%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||| | ||| | || ||||| |||| || | || ||| || Sbjct 2389280 AAGATGCAGATTTTCGTAAAACCCTTA-CAGGGAAAACCATCACACTCAAGGTTGAACCC 2389222 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||| | || || | ||| || || || || ||| | || ||||| || ||| Sbjct 2389221 TCAGATATGATAGAAAATGTGAAAGCCAAGATCCAGGATAAGTAAGGAATTCCTCCTGAT 2389162 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || |||| ||| | || | || || ||| Sbjct 2389161 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTAGAAGATTGATGTACTTTGTCTGACTAC 2389102 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||||||||| || ||||| Sbjct 2389101 AACATTCAAAAGGAGTCCAC 2389082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419688135415045