Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq25 109 5e-19 seq46 100 2e-16 seq158 96.9 3e-15 seq9 87.8 2e-12 seq21 86.0 5e-12 seq212 82.4 6e-11 seq102 82.4 6e-11 >seq25 Length=21972308 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| ||||| || || | ||| | || || || |||||||||||||| || Sbjct 20948577 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 20948518 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||| | |||||| ||||| || ||||| | ||||| | || || || ||||| Sbjct 20948517 CAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 20948458 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| || | || ||| | || || | || ||| || Sbjct 20948457 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAAC 20948398 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || |||||||||||||||||||| Sbjct 20948397 CTCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq46 Length=13992998 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || || ||||| || | ||||||| ||||||||| || || ||| Sbjct 3038578 GTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCTTCAAGCTGCTTGCCA 3038519 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| ||||| || |||||||| || ||||| || Sbjct 3038518 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCTTGGATCTTGGCCTTC 3038459 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 3038458 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTC 3038399 Query 114366 TTTACAAA 114373 || ||||| Sbjct 3038398 TTCACAAA 3038391 >seq158 Length=4245986 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| |||| ||||| || || | ||| | || || || |||||||||||||| || Sbjct 3727851 ACCACCACAAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 3727792 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||| |||||| ||||| || ||||| | ||||| | || || || ||||| Sbjct 3727791 CAAAGTATCTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 3727732 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| || | | ||| | || || | || ||| || Sbjct 3727731 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAAC 3727672 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || |||||||||||||||||||| Sbjct 3727671 CTCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 3727624 >seq9 Length=38779656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| |||| ||||| || || | ||| | || || || |||||||||||||| || Sbjct 2389051 ACCACCACAAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 2389110 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| ||||||| ||||| || ||||| | ||||| | || || || ||||| Sbjct 2389111 CAAAGTACATCAATCTTCTAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 2389170 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| |||| || || ||||| ||| | | ||| | | || | || ||| || Sbjct 2389171 AATTCCTTACTTATCCTGGATCTTGGCTTTCACATTTTCTATCATATCTGAGGGTTCAAC 2389230 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | | || | ||||| || || || | |||||| ||||||||||| Sbjct 2389231 CTTGAGTGTGATGGTTTTCCCTGTAAG-GGTTTTACGAAAATCTGCAT 2389277 >seq21 Length=25602908 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| ||||| || || | || | || || || |||||||||||||| || Sbjct 20609900 ACCACCACGAAGTCTTAATACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 20609841 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| ||||| || ||||| | ||||| | || || || ||||| Sbjct 20609840 CACAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 20609781 Query 114275 AATGCCTTCTTTGTC 114289 ||| |||||||| || Sbjct 20609780 AATTCCTTCTTTATC 20609766 >seq212 Length=2426081 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| || || | ||| | || || || |||||||||||||| || | |||||| Sbjct 1901301 AGTCTTAACACAACATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGT 1901246 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| ||||| || || || | ||||| | || || || |||||||| ||||| Sbjct 1901245 CCATCTTCCAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1901186 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || ||||| || | | ||| | || || | || ||| | || | || Sbjct 1901185 TTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTG 1901126 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || || || |||||||| ||||||||||| Sbjct 1901125 ATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 1901088 >seq102 Length=7754592 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| ||||| || || | ||| | || || || |||||||||||||| || Sbjct 7635992 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 7635933 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| ||||| || ||||| | | ||| | || || || ||||| Sbjct 7635932 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAACGAGTCTTTGCTGATCAGGAGG 7635873 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| || | | ||| | || || | || || || Sbjct 7635872 AATTCCTTCCTTATCCTGGATCTTGACCTTCACATTTTCTATTGTATCCGAGGGGTCAAC 7635813 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || | || ||||||| || |||||||| Sbjct 7635812 CTCGAGAGTGATGGTCTTCCCCATGAGGGTTTTTATGAACATCTGCAT 7635765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420094496816316