Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq223 170 2e-37 seq283 111 1e-19 seq12 105 6e-18 >seq223 Length=2232465 Score = 170 bits (188), Expect = 2e-37 Identities = 418/631 (66%), Gaps = 2/631 (0%) Strand=Plus/Minus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||| || || ||||||||||| || || | ||| || || || | |||||||| | || Sbjct 1612997 GTAAATATGTGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCAGTGATGTG 1612938 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 | | | | || || | ||||| |||||||||||||| || || || |||| ||| | Sbjct 1612937 CGTGATCTTGTACGTGAGCAGGGAGTAGCTGGCAATGTTGAACGGCACACCCAGGCCCGT 1612878 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 |||||| ||| ||| |||||||| | || || ||||||| | || || || || || Sbjct 1612877 GTCTCCTGACTGCTGGTACAGCTGGC-GGTCAGTTCACCGTTCACCACGTAGAACTGGCA 1612819 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 || || || || || || | ||||| | | || |||||||| |||| ||| Sbjct 1612818 GAAGGCATGGCACGGAGGTAGTGTCATCAGAGGAAGATCTTTTGGGTTCCAAGCACGCAT 1612759 Query 20431 AATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTC 20490 ||||||||||| || | || || |||| || ||| | | | | |||||||| Sbjct 1612758 GATGATTCTTCTGTCATCAGGGTTGGTTTTGATGGTATCAATCACTTTCTGCAATTGGT- 1612700 Query 20491 AAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCA 20550 || || || |||| ||| || | |||| || ||| | || ||||| |||||||| Sbjct 1612699 AACTCCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCTGCTCCAAAATGCCTCCA 1612640 Query 20551 CTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGC 20610 |||||| || ||||| | || || || || || ||| | | | || | | | Sbjct 1612639 CTGGAAGCCATAAACTAGGCCAAAGTCACCTTCTTCTCTTTTGGATAATCCCAGGCTATC 1612580 Query 20611 CAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCT 20670 || || || | | ||||| ||||| || || |||||| | || ||||| | Sbjct 1612579 CAAAAAGTCTCGGTGTCCATTGGCATCCCAGATTTTCACTCCTTTGGAAGATAGCTCTTT 1612520 Query 20671 GGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACAC 20730 | | || ||||| | |||||| |||| ||| | || || || ||| ||||| Sbjct 1612519 AGCTTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACAC 1612460 Query 20731 CCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGCAGACTATACCTGGCCTGCATGCCAAA 20790 | || || || || | ||||| | || | | || || | ||||||||||||||| Sbjct 1612459 ACATTTGGTTGTCAGCAGTGGAAATTCATCTTTCCGGCTGTAGCGGGCCTGCATGCCAAA 1612400 Query 20791 TAGAGAGAGGGTGCCTATGCCGGTGCGGTCG 20821 | || || ||||| || | ||||||||| Sbjct 1612399 CACCGACAGAGTGCCGGTGTCCGTGCGGTCG 1612369 >seq283 Length=1095284 Score = 111 bits (122), Expect = 1e-19 Identities = 190/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230 |||||||| || || | ||| || | ||||||||||| || || | ||| || || Sbjct 231066 AGTGGCTCAATGTGATTCAGGTAAATATATGCATCTCCCAAAGTATGTACAAAGTCACCT 231125 Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290 || | ||||| || || || | | |||||| || | ||||| | ||||| ||||| Sbjct 231126 GGCTTCAGACCGGTGACGTGTGAGATCATATAGGTGAGCAGGGAGTGACTGGCCATGTTG 231185 Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC- 20349 || || | |||| || |||||||| ||| ||| |||||||||||||| |||||||| Sbjct 231186 AATGGCAAGCCCAGGCCTATGTCTCCTGACTGCTGGTACAGCTGACAGGATAGCTCACCA 231245 Query 20350 GTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTC 20409 |||| | | | || || || | ||| | | || |||||||||| | | || Sbjct 231246 GTCACCCTGA-AGAACTGGCAAAGGGCATGATACGAAGGCAGCGCCATCAGAGGTACATC 231304 Query 20410 CGCCGGGTTCCACGCACACATAATGATTCTTCT 20442 |||||||| ||||| | ||||||||||| Sbjct 231305 TTTTGGGTTCCAAGCACATGTGATGATTCTTCT 231337 >seq12 Length=32490354 Score = 105 bits (116), Expect = 6e-18 Identities = 121/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 |||||||| | || || | ||| || || | ||||| |||||||| ||||| || || Sbjct 30593165 AGACCAGTGATGTGCGCGATCATGTACGTGAGCAGGGAGTAGCTGGCGATGTTGAACGGC 30593106 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| |||||||||||| |||| ||| |||||||| ||||| |||||||||| | Sbjct 30593105 ACACCCAGACCCATGTCTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 30593046 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || || || || || | || || || || || ||||||| Sbjct 30593045 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGTAGTGCCATCA 30593003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441329804772120