Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq55 96.9 4e-15 >seq55 Length=12078711 Score = 96.9 bits (106), Expect = 4e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| || || || ||||| || |||| || |||||||| || |||||||| || || | Sbjct 2461460 AGGGTTATCTGGGTTGCCAAGCTTTGTCTGAGATGATCCAGTTTTACCTGGAAGAGGTGA 2461519 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 ||||||||||||| ||||| || || | |||||| ||||| || || | || |||| Sbjct 2461520 TGCCACAGGCTGAGAACCATGAACCAGGCATCAAAGAGCATGTGAACTCCCTAGGAGAAA 2461579 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||| || |||| | ||||| Sbjct 2461580 AGCTGAAGAATCTCAGGCTGAGGCTGCG 2461607 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || ||||| | ||||||||||||||||| || ||||| || || ||||||| Sbjct 2463797 AGCTTCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTCGACATCTTCATCAACTACA 2463856 Query 10140 TAGAAGCATACATGACAA 10157 ||||| | |||||||||| Sbjct 2463857 TAGAAACCTACATGACAA 2463874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552662958474720