Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq212 116 9e-21 seq25 116 9e-21 seq21 114 3e-20 seq158 113 1e-19 seq46 109 1e-18 seq102 107 5e-18 seq9 104 6e-17 seq51 100 7e-16 seq99 95.1 3e-14 seq96 95.1 3e-14 seq65 93.3 1e-13 seq12 87.8 4e-12 seq67 86.0 1e-11 >seq212 Length=2426081 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||| ||||| | || | ||||| ||| || ||||| || || ||||| Sbjct 1901310 CCACCGCAAAGTCTTAACACAACATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC---- 1901255 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || ||||| || || || | || ||| | || Sbjct 1901254 AAAGTACGTCCATCTTCCAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGA 1901195 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || ||||| |||||||| | ||| | ||| | Sbjct 1901194 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCA 1901135 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || || || || ||||| |||||||| Sbjct 1901134 TCAAGAGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 1901088 >seq25 Length=21972308 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 20948576 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 20948517 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || |||| ||||| | ||| || || || || || || | || ||| | || Sbjct 20948516 AAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGA 20948457 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || ||||| |||||||| | ||| | ||| || Sbjct 20948456 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACC 20948397 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || || || || || || |||||||| Sbjct 20948396 TCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq21 Length=25602908 Score = 114 bits (126), Expect = 3e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | ||| || |||| ||| || ||||| || || ||||| | Sbjct 20609899 CCACCACGAAGTCTTAATACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 20609840 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || || || || | || ||| | || Sbjct 20609839 ACAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGA 20609780 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||||||||||||||| || || ||||| |||||||| | ||| | ||| | Sbjct 20609779 ATTCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCAAGGGTTCAATC 20609720 Query 288427 TCGAGCGTGATCGTCTT-CCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||| | || || | || ||||||||||| Sbjct 20609719 TCGAGAGTGATGGTCTTCCCCCATAAGGGTTATTACAAATATCTGCAT 20609672 >seq158 Length=4245986 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 3727850 CCACCACAAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 3727791 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||| ||||| | ||| || || || || || || | || ||| | || Sbjct 3727790 AAAGTATCTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGA 3727731 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || ||||| |||||||| | ||| | ||| || Sbjct 3727730 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACC 3727671 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || || || |||||||| Sbjct 3727670 TCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 3727624 >seq46 Length=13992998 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || || || | || || ||||| ||| Sbjct 3038097 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAG 3038038 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||||||||||||||| || || ||||| || Sbjct 3038037 ATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTGGCCTTCACATTC 3037978 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| || ||||| || || ||| Sbjct 3037977 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTACG 3037918 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 3037917 AAGATTTGCATTTTG 3037903 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| ||||| | || || || || ||||| | || || || || ||| Sbjct 3038572 TCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAAG 3038513 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||||||||| ||||| || || ||||| || Sbjct 3038512 ATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCTTGGATCTTGGCCTTCACATTC 3038453 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || | ||||| ||||| |||||||| ||||| || Sbjct 3038452 TCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 3038393 Query 288463 AA 288464 || Sbjct 3038392 AA 3038391 >seq102 Length=7754592 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 7635991 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 7635932 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || || | || | || ||| | || Sbjct 7635931 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAACGAGTCTTTGCTGATCAGGAGGA 7635872 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || | ||||| |||||||| | ||| | || || Sbjct 7635871 ATTCCTTCCTTATCCTGGATCTTGACCTTCACATTTTCTATTGTATCCGAGGGGTCAACC 7635812 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| | || || || | ||| |||||||| Sbjct 7635811 TCGAGAGTGATGGTCTTCCCCATGAGGGTTTTTATGAACATCTGCAT 7635765 >seq9 Length=38779656 Score = 104 bits (114), Expect = 6e-17 Identities = 160/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 2389052 CCACCACAAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 2389111 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||||| ||| || || || || || || | || ||| | || Sbjct 2389112 AAAGTACATCAATCTTCTAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGA 2389171 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||| ||||||||||| || |||||||| |||||||| ||| | ||| || Sbjct 2389172 ATTCCTTACTTATCCTGGATCTTGGCTTTCACATTTTCTATCATATCTGAGGGTTCAACC 2389231 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| ||||| || ||||| || || || || ||||| |||||||| Sbjct 2389232 TTGAGTGTGATGGTTTTCCCTGTAAGGGT-TTTACGAAAATCTGCAT 2389277 >seq51 Length=12882142 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| ||||| | || || | || ||||| || || || || || ||| Sbjct 9170520 TCTTTCTGGATATTGTAGTCAGAAAGAGTACCACCATCTTCAAACTGCTTGCCAGCAAAG 9170461 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||||||||| ||||| || || ||||| || Sbjct 9170460 ATGAGCCTCTGCTGGTCAGGAGGGATACCTTCTTTATCTTGGATCTTGGCCTTCACATTC 9170401 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| || ||||| | || | | Sbjct 9170400 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGCTTTTTATG 9170341 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 9170340 AAGATTTGCATTTTG 9170326 >seq99 Length=7922563 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||||||||| || || ||||| |||||||| | ||| | ||| Sbjct 586284 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCCGAGGGTTCA 586343 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 586344 ACCTCGAGAGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 586393 >seq96 Length=8018273 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 288285 TTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGAT 288344 ||| ||||| || || || | || ||||| || || || | ||||| ||||| || || Sbjct 7716971 TTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATAT 7717030 Query 288345 CAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404 ||||||||| || | ||| || || || ||||| |||||||| ||||| || || || Sbjct 7717031 CAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTC 7717090 Query 288405 TATAGAATCGCTCGATTCTACTTCG-------AGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 || | || || | ||| || ||| || || || ||||| || |||| |||| Sbjct 7717091 AATGGTGTCACTGGGTTCGACCTCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCT 7717150 Query 288458 TGACGAATATCTGCAT 288473 | || || |||||||| Sbjct 7717151 TCACAAAGATCTGCAT 7717166 >seq65 Length=11138919 Score = 93.3 bits (102), Expect = 1e-13 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 288315 TCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTC 288374 ||| ||||| | ||| || || || || || || | || ||| | || || ||||| Sbjct 6551948 TCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCCTTGCTGATCAGGAGGAATGCCTTC 6551889 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 ||||||||||| || || ||||| |||||||| | ||| | ||| || ||||| || Sbjct 6551888 CTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGT 6551829 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||||| || || || || ||||| |||||||| Sbjct 6551828 GATGGTCTTCCTCGTGAGGGTTTTTACGAAAATCTGCAT 6551790 >seq12 Length=32490354 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/227 (70%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | ||| ||||||| ||| || ||||| |||| ||||| | Sbjct 19654621 CCACCACAAAGTCTTAATACAAGATGAAGAGTGGACTCCTTTTGACTATTGTAGTCAGAC 19654562 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || ||||| ||| || ||| || || || || || || | |||| | |||| Sbjct 19654561 AAAGTACGTCCATCTA-TAGTTGCTTGCCAGCAAA-ATGAGTCATTGCTGATCAGAA--- 19654507 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||||||||| || || || || |||||||| | || | ||| Sbjct 19654506 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATATAGGGGTTCA 19654447 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 ||| ||| ||||| |||||| | || | | || ||||| ||||| Sbjct 19654446 ACTCTGAGAGTGATGGTCTTCTCCGTAGGGGCTTTAACGAAAATCTG 19654400 >seq67 Length=10508679 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| |||||||| | || |||||| || | || ||||| || || |||| | Sbjct 1873708 CCACCACGGAGTCTTAACACACGATGAAGCGCGGACTCCTTTTGAATGTTGCAGTCAGAC 1873649 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || | || | | || ||| | || Sbjct 1873648 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAACAATGAATCTTTGCTGATCAGGAGGA 1873589 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| | |||||||| || || ||| | |||||| | ||| ||||| || Sbjct 1873588 ATTCCTTCCCTGTCCTGGATCTTGGCCTTCCCATTTTCTCTCATATCTGAGGATTCAACC 1873529 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||||||||||| |||||||| || || || || || Sbjct 1873528 TCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTTAC 1873494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179536614088654