Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq96 100 3e-16 seq46 96.9 4e-15 seq227 91.5 2e-13 seq223 91.5 2e-13 seq99 91.5 2e-13 seq16 91.5 2e-13 seq7 89.7 6e-13 seq25 82.4 8e-11 >seq96 Length=8018273 Score = 100 bits (110), Expect = 3e-16 Identities = 163/234 (70%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||| | ||||| |||| || || || || || |||||||| | Sbjct 7716933 CCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGAA 7716992 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || ||||| || || || ||||| || ||||||||||| | ||| Sbjct 7716993 AGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGGA 7717052 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || |||||| || |||||| ||||| || | | ||||| || | ||| || Sbjct 7717053 ATGCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGACC 7717112 Query 42162 TC-GACC------GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| || || || |||||| | || ||||| |||||||| ||||| Sbjct 7717113 TCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq46 Length=13992998 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| |||| ||||| || | || || |||||||| || || || Sbjct 3038098 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAA 3038039 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||||| || | | || || ||| ||| || || | | Sbjct 3038038 GATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTGGCCTTCACATT 3037979 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | ||||| || | |||||||| ||||| || || || ||||| Sbjct 3037978 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTAC 3037919 Query 42197 AAAGATTTGCATTTTCAC 42214 |||||||||||||| || Sbjct 3037918 GAAGATTTGCATTTTGAC 3037901 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 11043557 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 11043498 Query 57065 TATACTACCGAGGATTGA 57082 ||||||| |||||| ||| Sbjct 11043497 TATACTAACGAGGAGTGA 11043480 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || |||||||| |||| ||||| || | || || |||||||| ||||| || Sbjct 3038573 CTCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAA 3038514 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||||| || | | || || || ||| || || | | Sbjct 3038513 GATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCTTGGATCTTGGCCTTCACATT 3038454 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | ||||| || | |||||||| ||||| || || ||||| || Sbjct 3038453 CTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 3038394 Query 42197 AAA 42199 ||| Sbjct 3038393 AAA 3038391 >seq227 Length=2111159 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| |||||||||||||||||| || ||||||||||| Sbjct 1634856 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGTGGGGATACTCACCAC 1634797 Query 57065 TATACTACCGAGGATTGA 57082 ||||||| |||||| ||| Sbjct 1634796 TATACTAACGAGGAGTGA 1634779 >seq223 Length=2232465 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1724608 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1724549 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 1724548 ATACTAACGAGGA 1724536 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1798796 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1798855 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1798856 TACTAACGAGGA 1798867 >seq99 Length=7922563 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 5200892 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5200951 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 5200952 TACTAACGAGGAT 5200964 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 5194331 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5194390 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 5194391 TACTAACGAGGA 5194402 >seq16 Length=30363061 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 29681351 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 29681410 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 29681411 ATACTAACGAGGA 29681423 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29746433 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29746492 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 29746493 TACTAACGAGGA 29746504 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29752252 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29752311 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 29752312 TACTAACGAGGA 29752323 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29767824 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29767765 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 29767764 TACTAACGAGGA 29767753 >seq7 Length=42659167 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 24023600 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24023659 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 24023660 TACTAACGAGGA 24023671 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 21897190 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 21897249 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 21897250 ATACTAACGAGGA 21897262 >seq25 Length=21972308 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 41997 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 42056 ||||| | ||| | ||| |||||||||||| ||||| |||| || ||| | | || Sbjct 20948561 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCT 20948502 Query 42057 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 || || ||||| ||||| || ||||||| ||||| || | || | | ||||| ||| Sbjct 20948501 TCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 20948442 Query 42117 ATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 42176 ||| || || | | | | | ||| || | ||| || || | |||||||| Sbjct 20948441 TGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTC 20948382 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || || || || || |||||||| || ||||| || Sbjct 20948381 TTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 20948347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543159884283120