Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq158 98.7 7e-16 seq25 95.1 9e-15 seq63 82.4 5e-11 >seq158 Length=4245986 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | | |||||| || | |||||| || || || ||||| |||||||| || Sbjct 3727850 CCACCACAAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 3727791 Query 15010 AGAAT-TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 | | | |||| | ||||| | ||| |||||||| | || | | || || || || Sbjct 3727790 AAAGTATCTC-CATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 3727732 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||| || || ||| || ||| ||||||| ||||| ||| || Sbjct 3727731 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAAC 3727672 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || ||||| || ||||| || |||||||||||||| ||||| || Sbjct 3727671 CTCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 3727621 >seq25 Length=21972308 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | |||||| || | |||||| || || || ||||| |||||||| || Sbjct 20948576 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 20948517 Query 15010 AGAAT-TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 | | | | || | ||||| | ||| |||||||| | || | | || || || || Sbjct 20948516 AAAGTATGTC-CATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 20948458 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||||||||| || || ||| || || ||||||| ||||| ||| || Sbjct 20948457 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAAC 20948398 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || ||||| || ||||| || |||||||||||||| ||||| || Sbjct 20948397 CTCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 20948347 >seq63 Length=11284890 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 14978 GGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGA-ATTCTCG-CGTCTTCTAATTGTTT 15035 ||||| | ||||| || |||||||||| |||| | | | | | | | || | |||||| Sbjct 6709650 GGGTAAACTCTTTCTGAATGTTGTAAT--CTGAAAGAGTGTGGCCATACTCGAGTTGTTT 6709593 Query 15036 GCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCT 15095 || || |||||| || ||| ||||| | |||||| || ||||| || |||||| Sbjct 6709592 ACCTGCAAATATCAGACACTGCTGGTCATATGGAATGCCCTCCTTATCTTGGATTTTGGC 6709533 Query 15096 TTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTA-ATGGTTTTACCTGTCA 15154 ||| ||| | | || || || || || || || |||| | ||||| || ||||||| Sbjct 6709532 TTTGACATTCTTGATGGTGTCACTGGGCTCAACCTC-AAGGCAGATGGTCTTGCCTGTCA 6709474 Query 15155 GAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| || ||||| Sbjct 6709473 GGGTGTTCACAAAGATCTGCAT 6709452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357358055913005