Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq25 82.4 7e-11 >seq25 Length=21972308 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || ||||| | ||| | || ||||| |||||||| ||||| || Sbjct 20948579 GCACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 20948520 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || | ||| || || || || ||||| | || | || |||||||| ||| Sbjct 20948519 GACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGA 20948460 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| || Sbjct 20948459 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCA 20948400 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | || || || || || |||||||||||||||||||| Sbjct 20948399 ACCTCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475454480278320