Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq16 172 8e-38 >seq16 Length=30363061 Score = 172 bits (190), Expect = 8e-38 Identities = 209/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 8891 AACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATG 8950 || ||||| ||||||||||| || ||||| |||||||| | || || || | ||| Sbjct 7418292 AAGGGACAGCCCTTCACATTATTGCAGATGAGAGACTGAATTGAGGCAGTGTTGATGATT 7418233 Query 8951 TCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACG 9010 | |||||||| || || || || ||||| || |||||||| | || || || || | Sbjct 7418232 TTAAAACCTACTTCTCCACCAAAAGTGCTCGGCTTCCAGTAGTCAGGAGAACATATAGCA 7418173 Query 9011 TTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAG 9070 || |||| || ||||||||||| || || || || | || | ||| |||| || ||| Sbjct 7418172 TTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCAACTTCCACCATGGTCTCCCCAAAG 7418113 Query 9071 ATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACG 9130 |||||| | ||||| || ||||| || | | | ||| || | || | ||| || ||| Sbjct 7418112 ATGGCATCCGGACGAGGCTTTTCCACCAGAAGGGCAGGATAAAACTCCATAGCATCAACG 7418053 Query 9131 TCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || |||||||||||||||| ||| ||||| || |||||||| ||| Sbjct 7418052 TCACCATAGAGGGCTTCCAGCTCTGCAGCCATTTCCTTCTCTCCT 7418008 Score = 140 bits (154), Expect = 5e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 9736 GTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAG 9795 ||||| || |||||| ||||||| ||||||| || || || || || || || ||||| Sbjct 7416420 GTGGTCTGGAACAACCTCTCGTCATCCCATTCTGGATGCTCCTGCTTAAGCACGTCGCAC 7416361 Query 9796 ACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCA 9855 || ||||| ||||| | ||||| || |||||||||||||| | ||| ||||| | ||| Sbjct 7416360 ACTCTGTTATGTTCCCGAAGCCAGATTGTGGCGTACATCATCAGACCGGGCACCAGACCG 7416301 Query 9856 AACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATA 9915 || || || | |||||| ||||| ||| | || || || | || | || | ||| Sbjct 7416300 AAGACCTCGTGCCCCACAGCAAACTTCAGGTGTTCAGGGACGTGAGGGGGGTAGATCATC 7416241 Query 9916 TGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 | | || || |||||||| ||||| ||||||| ||| || ||||| Sbjct 7416240 TCTGCTTGAGTATCTTTGACTGTGGGAGGATACACTTCTCCATCAAT 7416194 Score = 131 bits (144), Expect = 2e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| || | ||| | |||||||| |||||||| | ||||| ||| | || Sbjct 7415339 TCTTACCCCATGGCCTAGCCCTTTGGTGAAAGCTGGTCCTCGTGCAATATCTGTCTTGAA 7415280 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 |||||| || ||||| || || | || || || ||||||| || |||||||||||||| Sbjct 7415279 AAATTGATGGGTAAAATGCTGGGCAAAGAACGCAAACATCAAATTTGTGCCCTGGGGATC 7415220 Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297 |||||| || | || | | || || ||| ||||||| || | ||||||| || || Sbjct 7415219 GGGGATGAACTTTCTTCTTAGAAGAAGTTTTTCCACAACCTCTTTTGAATCAGGAAG 7415163 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || || ||||| ||||||||| | || ||||| || | ||| ||| Sbjct 7414463 TCACCTTTCACACCCAGGGGAGTTGGGCAGTCATCGGCCACAGGAGGAAGGGCTCTGGTA 7414404 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || || || ||||||||||| |||||||| || | || || || Sbjct 7414403 TAATAGGAGAGGTTAGAGAAGGCTTCCCAGCTTTTGTAGCCGTAGTGTACATTATAAGTT 7414344 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || ||||| ||||||| | || |||||| Sbjct 7414343 GGTGGACTATCAATCAGATGTGATCTGGCT 7414314 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 10840 CTTACGGGTCGAACAGTGCCGATCATAAAACCCCGTCCGCGTACAATCGCACCAATAACG 10899 |||||| || ||||||| | ||||||| || ||||| |||||||| ||| ||| | Sbjct 7413395 CTTACGTGTTGAACAGTTTTCACCATAAAATCCTGTCCGGGTACAATCACACTTATACTG 7413336 Query 10900 ATCAAACCCCACCGTCATGCATACCCCTCGATTCTGGCACGGGTGCGAACAGCAAGGGTT 10959 || || ||||| ||||| ||||| ||||| || || || |||| ||||||||||| || Sbjct 7413335 GTCGAATCCCACGGTCATACATACACCTCGGTTTTGACATGGGTTGGAACAGCAAGGATT 7413276 Query 10960 GGCTGCA 10966 ||| || Sbjct 7413275 TGCTACA 7413269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723657499846200