Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq46 125 8e-24 seq96 113 5e-20 seq51 98.7 1e-15 >seq46 Length=13992998 Score = 125 bits (138), Expect = 8e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||| || | || ||| || ||||| |||||||| || |||||||| | Sbjct 3038121 CGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCA 3038062 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| || || || | | ||||||||||| || | | || || Sbjct 3038061 TCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTA 3038002 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | || | | ||||| || | ||||| |||| |||||| Sbjct 3038001 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 3037942 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || ||||| ||||| ||||| || ||||||||||||||| Sbjct 3037941 GTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCATTTTG 3037903 Score = 102 bits (112), Expect = 9e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| |||| || ||| || |||||||||||||| || Sbjct 3038609 GCCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGA 3038550 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 ||||| || | || || ||||||||||| || || || | | ||||||||||| || Sbjct 3038549 AAGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGG 3038490 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | || || || |||||| ||| | || | | ||||| || | ||||| Sbjct 3038489 GATACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 3038430 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 |||| |||||||| ||||| ||||| || || ||||| Sbjct 3038429 CTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAA 3038391 >seq96 Length=8018273 Score = 113 bits (124), Expect = 5e-20 Identities = 167/236 (71%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | ||| | |||||| |||| ||| || || ||||| ||||| || | Sbjct 7716931 TGCCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTG 7716990 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || |||||||| ||||| || ||||||| ||||||||||| | | Sbjct 7716991 AAAGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTG 7717050 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||| || ||| || |||| || | | ||||| || | ||| | Sbjct 7717051 GAATGCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGA 7717110 Query 46545 CATC-CACC------GTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || ||| || || || |||||| |||| || || |||||||| ||||| Sbjct 7717111 CCTCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq51 Length=12882142 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| || | || ||| || |||||||||||||| || Sbjct 9170557 GCCACCCCTCAGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGA 9170498 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 ||||| | | || || | ||||||||| || || || | | ||||||||| | || Sbjct 9170497 AAGAGTACCACCATCTTCAAACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGG 9170438 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | || || || |||||| ||| | || | | ||||| || | ||||| Sbjct 9170437 GATACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 9170378 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| |||| | ||||||||||||||| Sbjct 9170377 CTCCAGGGTGATGGTCTTGCCAGTCAGGCTTTTTATGAAGATTTGCATTTTG 9170326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565183338714360