Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq126 223 3e-53 seq46 131 2e-25 seq11 111 2e-19 seq96 96.9 3e-15 seq51 96.9 3e-15 seq22 87.8 2e-12 seq1870 82.4 8e-11 seq212 82.4 8e-11 >seq126 Length=6050536 Score = 223 bits (246), Expect = 3e-53 Identities = 428/628 (68%), Gaps = 20/628 (3%) Strand=Plus/Plus Query 132880 TGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCG 132939 || |||| ||||| || |||||||| || || || ||||| || ||| ||| ||||| Sbjct 4678564 TGTTTGAGCATCAGTCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 4678623 Query 132940 TTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAA 132999 ||| || || ||| ||||| || || ||||| |||||||| ||||| | ||| ||| Sbjct 4678624 TTGGAAAATGTGG-GCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAA 4678682 Query 133000 CTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTG 133059 || ||||| |||| || || || || || || || || | || || || | || Sbjct 4678683 GAACCAGAAAAAAAGATTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTA 4678742 Query 133060 GCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATC 133119 || |||||| | ||||| |||| |||| | ||||| | ||||| || |||| Sbjct 4678743 GCCTCTTTGTCCCCAATCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATT 4678802 Query 133120 GTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC----ACGTAGGTGTC 133175 |||| || || || || | || ||| ||| | || | | | ||| ||||| Sbjct 4678803 ATTTCAATAGCATTGAAGA----GAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTC 4678858 Query 133176 GATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA--------- 133226 || ||| ||||||||| || || | ||| |||||||| ||||| | Sbjct 4678859 AATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATG 4678918 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGAT 133285 || || || || || ||||| | ||| |||||||| || ||| || || |||| | Sbjct 4678919 GCTATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTG-GCTAAATCGTTCCACCAAGT 4678977 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 |||| || || ||||| || || || |||||||| ||||| || || ||||| | | Sbjct 4678978 TTTCATTTACTATGCCATCACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATC 4679037 Query 133346 GCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGA 133405 ||| ||| |||||| |||||| | ||||||| || || ||||||||||| Sbjct 4679038 TCTCTTTGGGCTTCAAGGTTGCCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAG 4679097 Query 133406 CGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGG 133465 | ||||| || ||| |||| ||||| || ||||| ||| ||||| |||| || | Sbjct 4679098 CCGTCCACAAAGACACCTCCGCTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAG 4679157 Query 133466 GAAAAATCACAAACCGGCGGGGGTTTTC 133493 |||| || ||||| | |||||||||||| Sbjct 4679158 GAAAGATGACAAAGCCGCGGGGGTTTTC 4679185 >seq46 Length=13992998 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||||||||| || || ||||| ||||||||| | || || ||| || Sbjct 3037904 AAAATGCAAATCTTCGTAAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 3037963 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| || ||||| || || || ||||| Sbjct 3037964 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGGATCCCTCCCGAC 3038023 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| ||||||| | || ||||| |||||||| || | ||||| || |||||| Sbjct 3038024 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTAC 3038083 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || || | || || || |||| ||||| |||| || || Sbjct 3038084 AACATCCAGAAAGAGTCAACCCTCCACCTGGTCCTGCGCCTGAGGGGTGG 3038133 >seq11 Length=36342412 Score = 111 bits (122), Expect = 2e-19 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 133297 ATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCG 133356 ||||| || || || |||||||| ||||| || || ||||| | | ||| | Sbjct 29862656 ATGCCATCACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTCAGGA 29862597 Query 133357 TTCAAGCGCTCCCAGTCGCGCG-TGTCCTTGGACAGGTCC-ACCTCCTCGACGGTCCAAA 133414 |||||| ||||||| || | ||||||| || || ||| |||||||| | ||||||| Sbjct 29862596 TTCAAGGTTTCCCAGT-GCTCAATGTCCTTAGAAAGATCCCACCTCCTCAGCCGTCCAAA 29862538 Query 133415 ACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCA 133474 | |||||||| ||||| || ||||| ||| ||||| |||| || ||||| || | Sbjct 29862537 AAGACGCCTCCGCTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGA 29862478 Query 133475 CAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 |||| |||||||||||||| | || ||| || || Sbjct 29862477 CAAAGCGGCGGGGGTTTTCTC-CAGCAGTGGTTC 29862445 >seq96 Length=8018273 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC-GAGGCC-- 38300 ||||| || || || || || || | |||||| || || ||| | || ||| |||| | Sbjct 7717166 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACTATTACCCTTGAGGTCCGAGGTCGA 7717107 Query 38301 ACC----GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 ||| |||| | | | | | |||| ||||||| || || ||||| ||||| | Sbjct 7717106 ACCCAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCACC 7717047 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 ||||| ||||| || || | || ||||||||||| || || | ||||| || || Sbjct 7717046 TGACCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAGGATGGCCGCACTCTTTCAGA 7716987 Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| || | | || ||||| ||||||| ||| ||||||| ||| Sbjct 7716986 TTACAACATCCAGAAATAGTCTACCCTGCACCTGGTGCTTCGTGTGAGAGGTGGC 7716932 >seq51 Length=12882142 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||| |||||| || || ||||| ||||||||| | || || ||| || Sbjct 9170327 AAAATGCAAATCTTCATAAAAAGCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 9170386 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| || ||||| || || || | ||| Sbjct 9170387 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCTGAC 9170446 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| ||||||| | || ||||| ||| | || || | | || || |||||| Sbjct 9170447 CAGCAGAGGCTCATCTTTGCTGGCAAGCAGTTTGAAGATGGTGGTACTCTTTCTGACTAC 9170506 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| || || | || || || |||| || ||| |||| || ||| Sbjct 9170507 AATATCCAGAAAGAGTCAACCCTACACCTGGTCCTCCGTCTGAGGGGTGGC 9170557 >seq22 Length=23169006 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAA 133455 |||||||| | |||||||| |||||||| ||||| || ||||| ||| ||||| Sbjct 2781469 ACCTCCTCAGCCGTCCAAAAAGACGCCTCCGCTTTCTTATACATTTGCCAAATGTCATGG 2781410 Query 133456 TATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 |||| || ||||| || ||||| |||||||||||||| | || ||| || || Sbjct 2781409 TATTCGATAGGAAAGATGACAAAGCGGCGGGGGTTTTCTCTCAGCAGTGGTTC 2781357 >seq1870 Length=3491 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| ||| |||| || | || || || |||||||| || | ||||||||| ||| Sbjct 1120 GACCAGCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGAC 1061 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| || || | || ||||| |||||||| ||| | ||||| || Sbjct 1060 TACAACATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGTCTCAGAGGTGG 1008 >seq212 Length=2426081 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||||||||| |||||||| || |||||||| | || | || || Sbjct 1901085 AAGATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCC 1901144 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | ||| | || | || |||| || || || |||||||| | || Sbjct 1901145 TCAGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1901204 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || | ||||||| || ||||| || ||||| || | || || | |||||| Sbjct 1901205 CAGCAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 1901260 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453 ||||| |||||||| | || || ||| | ||| Sbjct 1901261 AACATTCAAAAGGAGTCCACTCTTCATGTTGTG 1901293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500124076917120