Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq31 96.9 3e-15 >seq31 Length=18854210 Score = 96.9 bits (106), Expect = 3e-15 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || |||||||| ||||||| | ||| || | | |||| Sbjct 2248535 CCTCATGCTGCACATGGCACGTATATTTCTGCTCTTCTCCAGAAGGCACCACCACAGCTG 2248594 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| || || ||||| || | || ||| | | || Sbjct 2248595 CCCACTTCTGGAACGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGAG 2248654 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || | | ||| | || ||||| || | || || || ||||| |||||||| || Sbjct 2248655 TCTGATCCTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCTGCAGGGTAGAAGCCCTGGG 2248714 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || ||| |||||||| || | || |||||| || ||| || Sbjct 2248715 CCCAGCACCTCAGGGTGGCTTCACGGTCAGAGGTGGAGTGATGGGTCACATGTGCCTCTG 2248774 Query 589 G 589 | Sbjct 2248775 G 2248775 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||| | || || ||| | ||||||| | ||| || | || |||| Sbjct 2028421 CCTCATGCTGCACACGGCATGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCATAGCTG 2028480 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| || || ||||| || | || ||| | | || Sbjct 2028481 CCCACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGAG 2028540 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || | | ||| | || ||||| || | ||||| || ||||| |||||||| || Sbjct 2028541 TCTGATCCTCCTCATCCCGCTGCCAAGTCAGTGTAATCTCTGCAGGGTAGAAGCCCTGGG 2028600 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || | | |||||||| Sbjct 2028601 CCCAGCACCTCAGGGTGGCCTCACGGTCAG 2028630 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||||| | ||| || | | |||| Sbjct 2172274 CCTCATGCTGCACATGGCATGTGTATCTTTGCTCTTCTCCAGAAGGCACCACCACAGCTG 2172333 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| || || ||||| || | || ||| | | || Sbjct 2172334 CCCACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGAG 2172393 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || | | |||| | || ||||| || | || || || ||||| |||||||| || Sbjct 2172394 TCTGATCCTCTCCATCCCGCTGCCAAGTCAGTGTGATCTCTGCAGGGTAGAAGCCCTGGG 2172453 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || | | | |||||| Sbjct 2172454 CCCAGCACCTCAGGGTGGCCTCAGGGTCAG 2172483 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||||| | ||| || | | |||| Sbjct 2342874 CCTCATGCTGCACATGGCACGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCACAGCTG 2342933 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| || || ||||| || | || ||| | | || Sbjct 2342934 CCCACTTCTGGAACGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGAG 2342993 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || | | ||| | || ||||| || | ||||| || ||||| |||||||| || Sbjct 2342994 TCTGATCCTCCCCATCCCGCTGCCAAGTCAGTGTAATCTCTGCAGGGTAGAAGCCCTGGG 2343053 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || | | | |||||| Sbjct 2343054 CCCAGCACCTCAGGGTGGCCTCATGGTCAG 2343083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397709423089608