Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq63 91.5 1e-13 seq96 87.8 1e-12 >seq63 Length=11284890 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| || || ||||| | | ||| || || ||||| || |||||| Sbjct 6709642 TCTTTCTGAATGTTGTAATCTGAAAGAGTGTGGCCATACTCGAGTTGTTTACCTGCAAAT 6709583 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | |||||||| || || || |||||| || Sbjct 6709582 ATCAGACACTGCTGGTCATATGGAATGCCCTCCTTATCTTGGATTTTGGCTTTGAC--AT 6709525 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || |||||| || | | ||||| || || || || || |||| Sbjct 6709524 TCTTGATGGTGTCACTGGGCTCAACCTCAAGGCAGATGGTCTTGCCTGTCAGGGTGTTCA 6709465 Query 34969 CAAAGATCTGCAT 34981 ||||||||||||| Sbjct 6709464 CAAAGATCTGCAT 6709452 >seq96 Length=8018273 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/198 (70%), Gaps = 11/198 (6%) Strand=Plus/Plus Query 34793 TTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATAT 34852 |||||| ||||| || || ||||| | || |||| || |||||||| || |||||||| Sbjct 7716971 TTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATAT 7717030 Query 34853 TAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGC 34912 || || |||||||| | || | |||||||| || || || |||||| || | Sbjct 7717031 CAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTATCTTGGATTTTGGCTTTGAC--ATTC 7717088 Query 34913 T--ATCGATTCACCGGCCTCAACATCG-------ACGGTTATGGTTTTTCCCGTGAGAGT 34963 | || | |||| || || || ||| | ||| || || || ||| | || || Sbjct 7717089 TCAATGGTGTCACTGGGTTCGACCTCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGT 7717148 Query 34964 CTTCACAAAGATCTGCAT 34981 |||||||||||||||||| Sbjct 7717149 CTTCACAAAGATCTGCAT 7717166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324602767213704