Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq91 141 1e-28 seq16 114 2e-20 seq31 113 6e-20 >seq91 Length=8153774 Score = 141 bits (156), Expect = 1e-28 Identities = 197/276 (71%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 1890 AGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACACTGCCCCTGGAA 1949 ||||| ||||| ||| ||||||||||||| ||||||| ||||| || |||||| | Sbjct 381698 AGCTCAACCCCATCGATAATGAATGGGGTGCTGGGGGAGTTGGTAACCCTTCCCCTGAAG 381757 Query 1950 TTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCACTACAACGGCACCTCCATCGCC 2009 |||||| |||| |||||| || |||||||||||||| |||| || || || |||||| Sbjct 381758 TTTCCCACGGGAGAGAAGGCCATGTCCATCACCTGGCTTTACAGTGGAACATCTATCGCC 381817 Query 2010 TTTATTGCCCCCTCGGAGGCCAAGAGCCCCCAGATCCACCTAACCAATCCGAAACTGGGC 2069 || || | ||| | | | ||| | | |||| | ||| | || |||| | Sbjct 381818 TTCATAAGACTAAAGGAAGACCAAAGCTCAGAATCCCACGTGACCGACCCAAAACGAAGA 381877 Query 2070 AAGCGACTCAACTTCACGCAGTCCTACTCCCTACAACTGAGCAACCTAGAGATGGAAGAC 2129 |||| || | |||||| || || |||| | || || |||||||| ||||| |||| Sbjct 381878 GAGCGGCTGAGCTTCACTGGGTGCTGCTCCTTGCAGCTCAGCAACCTGATGATGGCAGAC 381937 Query 2130 ACCGGGTCCTACAGTGCCCTGATGTCCTCCGAGACC 2165 || || || ||||| |||| ||| || | |||||| Sbjct 381938 ACAGGATCTTACAGAGCCCAGATAGCCACAGAGACC 381973 Score = 140 bits (154), Expect = 4e-28 Identities = 185/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2205 AAACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAG 2264 ||||||| |||||| || || | |||||||| ||||||| || ||||| || ||| || Sbjct 385930 AAACTGAGGAACATACAAGTTACCAATCACATTCAACTGACTGAGAATAAGACCTGTGAA 385989 Query 2265 ATCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCC 2324 ||||| ||| |||| | ||| ||| | | | ||||| || | |||| ||| || || Sbjct 385990 ATCCACCTGGCCTGCTTTGTGGAGAACTCAAGTGACACTGTCGCATTCACGTGGCAGACC 386049 Query 2325 TTGGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGC 2384 | || || | | || || || ||| |||| | ||||||||||||||| || | Sbjct 386050 TCAGGAAACATACATCAACATAGTCCAAACTTCACTATCTCCTGGGACCCCAGAAATTCC 386109 Query 2385 AGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTC 2444 |||||| | ||||| || ||||| ||||| ||| | || |||||| | || || | ||| Sbjct 386110 AGTGAGGACAACTATACCTGCATAGCCGAGAACCCCGTCAGCAATTTATCCCTCTCTGTC 386169 Query 2445 TCGGCCCAGAAGCTGTG 2461 || |||||| ||| || Sbjct 386170 TCTGCCCAGGCGCTCTG 386186 >seq16 Length=30363061 Score = 114 bits (126), Expect = 2e-20 Identities = 227/336 (68%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 1868 AGGCGGTCCCGTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGA 1927 ||| ||| | || || || |||| |||||| |||| ||||| |||| || ||||| Sbjct 28845890 AGGGGGTGCAGTTTCACAGGACAGCATGACCCCGTTGATGGTGAACCGGGTTCTGGGGGA 28845831 Query 1928 GTCCGTAACACTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCA 1987 || |||| || ||||| | |||||| ||| |||||| || ||||||||||||| Sbjct 28845830 GTTGATAACTCTTGCCCTGAAGTTTCCCACGGAAGAGAAGGCCAGGTCCATCACCTGGGT 28845771 Query 1988 CTACAACGGCACCTCCATCGCCTTTATTGCCCCCTCGGAGGCCAAGAGCCCCCAGATCCA 2047 ||||| || || || || ||||| || | ||| | | | || | | ||| Sbjct 28845770 TTACAATGGAACATCTATTGCCTTCATAAGTCTAAGGGAAGACCAAAGTTCAGAACCCCA 28845711 Query 2048 CCTAACCAATCCGAAACTGGGCAAGCGACTCAACTTCACGCAGTCCTACTCCCTACAACT 2107 | | ||| | || ||||| | |||| || | |||||| || || |||| | || || Sbjct 28845710 CGTGACCGACCCAAAACTAAGAGAGCGGCTGAGCTTCACTGGGTGCTGCTCCTTGCAGCT 28845651 Query 2108 GAGCAACCTAGAGATGGAAGACACCGGGTCCTACAGTGCCCTGATGTCCTCCGAGACCAC 2167 |||||| | || || |||||| || || |||| |||| ||| || | |||||| | Sbjct 28845650 CAGCAACTTGACGACGGCAGACACAGGATCTTACACAGCCCAGATAGCCACAGAGACCTC 28845591 Query 2168 AGTTAACGTTTCCAGCTACACGCTGAGGATCTTCCG 2203 || ||| || || | |||||||||||||| Sbjct 28845590 TACGAAGTTTTTCACTTATGCTCTGAGGATCTTCCG 28845555 >seq31 Length=18854210 Score = 113 bits (124), Expect = 6e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || | ||||||||||| ||||||||||||||| || || | |||| Sbjct 2114785 CCCTCATGCTGCACATGGCATGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCACAGCT 2114844 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || ||||| |||||||| || || | || ||||| |||| | || ||| Sbjct 2114845 GCCCACTTCTGGAACGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGA 2114904 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | ||||| || || || || | ||| || | | | || || ||||| || || ||| Sbjct 2114905 GTCTGATCCTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCTGCCGGGTAGAAGCCCTGG 2114964 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 2114965 GCCCAGCACC 2114974 Score = 109 bits (120), Expect = 7e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || | ||||||||||| ||||||||||||||| || || | |||| Sbjct 2172273 CCCTCATGCTGCACATGGCATGTGTATCTTTGCTCTTCTCCAGAAGGCACCACCACAGCT 2172332 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || || || |||||||| || || | || ||||| |||| | || ||| Sbjct 2172333 GCCCACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGA 2172392 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | ||||| ||||| || || | ||| || | | | || || || || || || ||| Sbjct 2172393 GTCTGATCCTCTCCATCCCGCTGCCAAGTCAGTGTGATCTCTGCAGGGTAGAAGCCCTGG 2172452 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 2172453 GCCCAGCACC 2172462 Score = 104 bits (114), Expect = 3e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || | || |||||||| ||||||||||||||| || || | |||| Sbjct 2342873 CCCTCATGCTGCACATGGCACGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCACAGCT 2342932 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || ||||| |||||||| || || | || ||||| |||| | || ||| Sbjct 2342933 GCCCACTTCTGGAACGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGA 2342992 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | ||||| || || || || | ||| || | | | || || || || || || ||| Sbjct 2342993 GTCTGATCCTCCCCATCCCGCTGCCAAGTCAGTGTAATCTCTGCAGGGTAGAAGCCCTGG 2343052 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 2343053 GCCCAGCACC 2343062 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || ||||||||||| ||||||||||||||| || || |||||| Sbjct 2028420 CCCTCATGCTGCACACGGCATGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCATAGCT 2028479 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || || || |||||||| || || | || ||||| |||| | || ||| Sbjct 2028480 GCCCACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGA 2028539 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | ||||| || | || || | ||| || | | | || || || || || || ||| Sbjct 2028540 GTCTGATCCTCCTCATCCCGCTGCCAAGTCAGTGTAATCTCTGCAGGGTAGAAGCCCTGG 2028599 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 2028600 GCCCAGCACC 2028609 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 |||||||| || || | || |||||||| ||| ||||||||||| || || | |||| Sbjct 1585971 CCTTCATGCTGCACATGGCACGTGTATCTGTGCTCCTCTCCAGAAGGCACCACCACAGCT 1586030 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| ||||| || || | ||| || || || | || ||||| |||| | || || Sbjct 1586031 GCCCACTTTTGGAAGGTTCGATCCCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGG 1586090 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | || ||||| || || || | ||| || | | | || || || || || |||| || Sbjct 1586091 GTCTGGTCTTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAACTCAGG 1586150 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 1586151 GCCCAGCACC 1586160 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || | || || ||| | ||||||||||||||| || || | |||| Sbjct 2248534 CCCTCATGCTGCACATGGCACGTATATTTCTGCTCTTCTCCAGAAGGCACCACCACAGCT 2248593 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || ||||| |||||||| || || | || ||||| |||| | || ||| Sbjct 2248594 GCCCACTTCTGGAACGTTCCATCTCCTGCAGGCCTGGTCTCTATAAGCTCCATGTCCTGA 2248653 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | ||||| || || || || | ||| || | | | || || || || || || ||| Sbjct 2248654 GTCTGATCCTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCTGCAGGGTAGAAGCCCTGG 2248713 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 2248714 GCCCAGCACC 2248723 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || | ||||||||||| ||| ||||||||||| || || | |||| Sbjct 1905810 CCCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCT 1905869 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 ||| |||||||| || ||||| |||| || | || ||||| | || | || || Sbjct 1905870 GTCCACTTTTGAAAGGTTCCATCCCCAGAAGGTCTAGTCTCTATAAGGTCCATGTCCTGG 1905929 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | || ||||| || || || | ||| | | | | || || || || || || |||| Sbjct 1905930 GTCTGGTCTTCCCCATCACGCTGCCAGCTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGG 1905989 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 1905990 GCCCAGCACC 1905999 Score = 82.4 bits (90), Expect = 1e-10 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || || | || |||||||| ||| ||||||||||| || || | |||| Sbjct 1808470 CCCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCT 1808529 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || || || | ||| || || || | || ||||| |||| | || || Sbjct 1808530 GCCCACTTCTGGAAGGTTCTATCCCCTGCAGGCCTAGTCTCTATAAGCTCCATGTCCTGG 1808589 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | || ||||| || || || | ||| || | | | || || || || || || |||| Sbjct 1808590 GTCTGGTCTTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGG 1808649 Query 14358 GCCCAGCACC 14367 ||||| |||| Sbjct 1808650 GCCCAACACC 1808659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629221899950280