Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq126 210 3e-49 seq118 149 7e-31 seq22 116 4e-21 seq4 102 1e-16 seq36 82.4 9e-11 >seq126 Length=6050536 Score = 210 bits (232), Expect = 3e-49 Identities = 407/596 (68%), Gaps = 16/596 (3%) Strand=Plus/Plus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||| ||||| |||||||| |||||||| || || | |||||| ||||| || Sbjct 4678579 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG- 4678637 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | |||| ||| || | ||| ||||||| |||||||| |||||||| || Sbjct 4678638 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAG 4678697 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA 37355 || ||||| ||||||||||| ||||||| |||| || | || | | || | Sbjct 4678698 ATTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 4678757 Query 37356 ATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTT 37415 ||||| | || | ||||||| || ||||| ||| ||||||| || || Sbjct 4678758 ATCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTG 4678817 Query 37416 AAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATT 37475 |||||||| | |||||| |||| | || ||||| ||||| || | |||||||||| Sbjct 4678818 AAGAGAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATT 4678877 Query 37476 TCAGAGTGAATATTTTCAATAGCTATCTGAAAA---------CCATAAAAACACCTAGCT 37526 ||||| ||||| ||||| || || || || || | ||| ||||| | || Sbjct 4678878 TCAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCC 4678937 Query 37527 TCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATC 37585 || | |||| ||||| || | ||| | | | ||||||||||| ||||| ||||| Sbjct 4678938 TCTG-TAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATC 4678996 Query 37586 ACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGAT--AAT 37643 ||| ||||| || ||||| ||||||| | ||| || | ||| || | | | | || Sbjct 4678997 ACTTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTCTT--TGGGCTTCAAG 4679054 Query 37644 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCC 37703 || ||| | | ||| || || || | ||| || || ||| | ||||| ||| || Sbjct 4679055 GTTGCCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACC 4679114 Query 37704 AATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 || |||||||| |||||| |||| | || || ||||| || ||||| Sbjct 4679115 TCCGCTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 149 bits (164), Expect = 7e-31 Identities = 226/318 (71%), Gaps = 4/318 (1%) Strand=Plus/Plus Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||| ||||| || | |||||||||||| || || | |||||| ||||| || | ||| Sbjct 3435892 GCAAAGTCACAGTGCAGACCTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCA 3435951 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 | ||| | | |||| || || | | | ||||| || ||||||||||| || |||||||| Sbjct 3435952 GACATAAGAACTCTCTTCTTTAGCTAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATT 3436011 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358 | ||| || || ||||| || || | | | || ||||| || | ||| | ||| Sbjct 3436012 CTTTCTACAGCAGCAAAGGCCACCACTCTTTCCCCCAAAGTAGATTTTATATCTGCTATC 3436071 Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAG 37418 ||| ||||||||||| ||| | ||||||| ||||||||||| | || || Sbjct 3436072 CATCACAAGGTCCAATCTGCTTTTTTCTGAACACATGGCATTGTTTCAATCACATTAAAT 3436131 Query 37419 AGAAAGt-ttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 | ||| | ||||||| ||||| || ||||| || |||| ||||| ||||| || Sbjct 3436132 AAAAAATCCCTTTTCTT-GGGATCTG--ATGTAAGTGTCTGTTAGCAAACTGTACATCTC 3436188 Query 37478 AGAGTGAATATTTTCAAT 37495 ||||||| ||| || || Sbjct 3436189 TGAGTGAACATTCTCGAT 3436206 >seq22 Length=23169006 Score = 116 bits (128), Expect = 4e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||| ||||| || | || ||||| | |||| ||| || Sbjct 2785904 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2785845 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| ||||||| ||||||||| ||||||||||| || ||||| ||||| ||||| ||| Sbjct 2785844 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGCT 2785785 Query 37320 ACAAGACGT 37328 |||| |||| Sbjct 2785784 ACAACACGT 2785776 Score = 91.5 bits (100), Expect = 2e-13 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||||| | |||||||| || |||| |||| || || || || |||||||||| Sbjct 2788331 CATCACTCCCATCCTCTGATATTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTT 2788273 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| ||||| |||||||| ||||||||||| Sbjct 2788272 CCAGTGAAATATTCTCCATAAAGTCAAATGGATT 2788239 >seq4 Length=47749213 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| ||||| || | || ||||| | |||||| || | Sbjct 24674284 CTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCT 24674225 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 24674224 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 24674165 Query 37318 CTAC 37321 | || Sbjct 24674164 CCAC 24674161 >seq36 Length=16585812 Score = 82.4 bits (90), Expect = 9e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||| ||| | |||||||| || |||| |||| || || || || |||||||||| Sbjct 11366934 CATCACTCTCATCCTCTGATATTCCCCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTT 11366992 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | || || ||||| |||||||| ||||||||||| Sbjct 11366993 CCAGGGAAATATTCTCCATAAAGTCAAATGGATT 11367026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592259100939720