Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq30 82.4 2e-11 >seq30 Length=19069346 Score = 82.4 bits (90), Expect = 2e-11 Identities = 184/267 (69%), Gaps = 17/267 (6%) Strand=Plus/Minus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| ||| ||| | || | | || || || || | || ||||| Sbjct 10367636 TGGGTGTTATGGAAGAGTAGTTCC-ATGTTCTGCTTGGCTGCAAAACACTTTATAGATGT 10367578 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || ||| || | ||| || || | ||||| ||| |||||||||| Sbjct 10367577 AGGAGCTGGTGTCATAGATGAGGATTATAGAGGAAATGGTGGTGGTGTACTATTTAATTT 10367518 Query 1085 TAGC-GATAAGCGTTTTCATATTTCAAG--AGGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || | || |||| | ||||| || |||| ||||||| || | ||||||| Sbjct 10367517 TGGCAAAGAAAAGTTT---GAAGTCAAGAAAGATGATCGGATTGCACATCTCATTTGTG- 10367462 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGATTC----CTTAGAGGATTCGGAAAGGG 1197 || || | ||||| ||||| |||||| | ||| || || || | ||||||| Sbjct 10367461 AATGGATTTTTTT--ATCCA--GAAATAGAAG-TTCAAGTTTTGGATGACACTGAAAGGG 10367407 Query 1198 GTTCTGCAGGATTTGGGTCTACCGGAA 1224 |||| | ||| ||||| || || |||| Sbjct 10367406 GTTCAGGAGGTTTTGGTTCCACTGGAA 10367380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138668766144708