Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq158 113 4e-20 seq25 109 4e-19 seq96 104 2e-17 seq21 98.7 8e-16 seq46 96.9 3e-15 seq63 93.3 3e-14 seq65 89.7 4e-13 seq51 87.8 1e-12 seq6 86.0 5e-12 seq72 84.2 2e-11 >seq158 Length=4245986 Score = 113 bits (124), Expect = 4e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGT-TCTGGCAT 101315 ||| || | |||||| || || || ||||| || ||||| || | | ||| ||| ||| Sbjct 3727836 TAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTC-CAT 3727778 Query 101316 CGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTAT 101375 | |||| |||||| || ||||| || | | || ||||| || ||||| ||||| |||| Sbjct 3727777 CTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 3727718 Query 101376 CTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCG 101435 | || || || || ||| |||||| || || || | ||| || || ||||||| | Sbjct 3727717 CCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGG 3727658 Query 101436 TTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || | ||||||||||| |||||||| Sbjct 3727657 TCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 3727624 >seq25 Length=21972308 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 ||| || | |||||| || || || ||||| || ||||| || | | ||| |||| Sbjct 20948562 TAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATC 20948503 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 |||| |||||| || ||||| || | | || ||||| || ||||| ||||| ||||| Sbjct 20948502 TTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 20948443 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436 || || || || || |||||| || || || | ||| || |||||||||| || Sbjct 20948442 CTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGT 20948383 Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | ||||||||||| |||||||| Sbjct 20948382 CTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq96 Length=8018273 Score = 104 bits (114), Expect = 2e-17 Identities = 163/234 (70%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || | || |||||||| | ||| || || |||||||| | Sbjct 7716933 CCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGAA 7716992 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | || || ||||||||||||| |||||| || || || ||| Sbjct 7716993 AGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGGA 7717052 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC---- 101418 ||||| || |||||||| ||||| ||| ||| | || | |||||| | ||| Sbjct 7717053 ATGCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGACC 7717112 Query 101419 ---CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| || | || ||||| | | || || ||||| |||||||| Sbjct 7717113 TCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq21 Length=25602908 Score = 98.7 bits (108), Expect = 8e-16 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || ||||| || ||||| || | | ||| | |||| |||| |||| Sbjct 20609875 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTACGTCCATCTTCCAGTTGC 20609816 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | || ||||| || ||||| ||||||||||| || || || Sbjct 20609815 TTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATCTTG 20609756 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||||| || || | | ||| | || ||||||| || || || | Sbjct 20609755 GCCTTCACATTTTCTATTGTATCCAAGGGTTCAATCTCGAGAGTGATGGTCTTCCCCCAT 20609696 Query 101447 AA-AGTTTTTACAAATATCTGCAT 101469 || ||| |||||||||||||||| Sbjct 20609695 AAGGGTTATTACAAATATCTGCAT 20609672 >seq46 Length=13992998 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | ||| | |||| |||| ||| Sbjct 3038109 TGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGC 3038050 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| || || ||||||||||| || || || Sbjct 3038049 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTG 3037990 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||||| || || |||| || ||||| || Sbjct 3037989 GCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTC 3037930 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | |||||||| || || ||||| Sbjct 3037929 AGGGTTTTTACGAAGATTTGCAT 3037907 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || |||||||| || | | ||| | |||| || | ||| Sbjct 3038584 TGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCTTCAAGCTGC 3038525 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || ||||| || || |||||||||||||| || || Sbjct 3038524 TTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCTTGGATCTTG 3038465 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||||| || | |||| || |||||||| Sbjct 3038464 GCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTC 3038405 Query 101447 AAAGTTTTTACAAA 101460 | || || ||||| Sbjct 3038404 AGGGTCTTCACAAA 3038391 >seq63 Length=11284890 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 101271 GGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTAC 101330 ||||| | ||||| || || |||||||| | | ||| | ||| || | ||| |||| Sbjct 6709650 GGGTAAACTCTTTCTGAATGTTGTAATCTGAAAGAGTGTGGCCATACTCGAGTTGTTTAC 6709591 Query 101331 CTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTT 101390 |||||||||||| || ||| || || |||||||| || |||||||| ||||| || Sbjct 6709590 CTGCAAATATCAGACACTGCTGGTCATATGGAATGCCCTCCTTATCTTGGATTTTGGCTT 6709531 Query 101391 TTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAG 101450 | ||| | | | |||||| | || || ||||| || || ||||| || | | Sbjct 6709530 TGACATTCTTGATGGTGTCACTGGGCTCAACCTCAAGGCAGATGGTCTTGCCTGTCAGGG 6709471 Query 101451 TTTTTACAAATATCTGCAT 101469 | || ||||| |||||||| Sbjct 6709470 TGTTCACAAAGATCTGCAT 6709452 >seq65 Length=11138919 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| |||| |||||| || ||||| || | | || ||||| || ||||||||||| | Sbjct 6551946 CATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCCTTGCTGATCAGGAGGAATGCCTTCCT 6551887 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 |||| || || || || ||| |||||| || || || | ||| || || ||||||| Sbjct 6551886 TATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTGA 6551827 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || | |||||||| || |||||||| Sbjct 6551826 TGGTCTTCCTCGTGAGGGTTTTTACGAAAATCTGCAT 6551790 >seq51 Length=12882142 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || |||||||| || | | ||| | |||| || || ||| Sbjct 9170532 TGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACCACCATCTTCAAACTGC 9170473 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || || || || |||||||||||||| || || Sbjct 9170472 TTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATACCTTCTTTATCTTGGATCTTG 9170413 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||||| || || |||| || ||||| || Sbjct 9170412 GCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTC 9170353 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | |||||| || || ||||| Sbjct 9170352 AGGCTTTTTATGAAGATTTGCAT 9170330 >seq6 Length=46294980 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/200 (69%), Gaps = 14/200 (7%) Strand=Plus/Minus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||| |||||||||| || || |||||||| | | ||| | |||| || || || || Sbjct 41518329 AGGCTAGATTCTTTCTGGATGTTGTAATCTGAAAGAGTGTGGCCATCTTCGAACTGTTTG 41518270 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 ||||||||||||| || ||| || || || |||||||| |||| | | Sbjct 41518269 CCTGCAAATATCAGACACTGCTGGTCAGGTGGAATGCC--CTTTGGC------------T 41518224 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || ||| ||||| |||||| | || || ||||| |||| || ||||| || | Sbjct 41518223 TTGACATTTTCTGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGG 41518164 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || ||||| |||||||| Sbjct 41518163 GTCTTCACAAAGATCTGCAT 41518144 >seq72 Length=9996315 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 ||| || | |||||| ||||| || ||| || ||||| || | | ||| |||| Sbjct 7284785 TAACACAAGATGAAGAGTAGACTCCTTTCAAATGTTGTAGTCAGACAAAGTATGTCCATC 7284844 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 |||| |||||| || |||| || | | || ||||| || | ||| ||||||||||| Sbjct 7284845 TTCCAGTTGCTTGCCAGCAAGAATGAGTCTTTGCTGATCAGGAGAAATTCCTTCTTTATC 7284904 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436 || || || |||||| |||||| | || |||| ||| | | |||||||| || Sbjct 7284905 CTGGATCTTGGCCTTTACACTTTCTAGTATATCTGACGGTTCAATCTGGAGAGTGACGGT 7284964 Query 101437 TTTGCCGGTTAAAG----TTTTTACAAATATCTGCAT 101469 ||| || | | | ||||| |||| |||||||| Sbjct 7284965 TTTTCCCATAAGGGTTTTTTTTTCCAAAAATCTGCAT 7285001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396240762592101