Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq127 178 2e-39 seq105 123 5e-23 seq126 118 2e-21 seq1 91.5 3e-13 seq66 89.7 1e-12 >seq127 Length=5963427 Score = 178 bits (196), Expect = 2e-39 Identities = 185/243 (76%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444 ||| |||| ||||| | || | ||| || ||||| ||||||||| ||||||||||| Sbjct 1790746 AGCAGCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 1790805 Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504 ||||| || | | |||||| | ||||| || || || || | |||||| |||||| Sbjct 1790806 TCCCGGAGGAGGCCGGCGGTACTCGACAGCCCGGCATTCTCGGCCTTGAGTGTCTTCACC 1790865 Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564 || |||||||| |||||||| || ||||| || ||| ||||| || ||||| ||||| Sbjct 1790866 TTGTCCTCCAGGCGCGCGATACGCTCCAGCTTCCGCTTCCGGCACTTTGTGGCCGCCAAC 1790925 Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624 |||||||| || | || || ||| | |||||||| |||||||| ||||||| ||| || Sbjct 1790926 CGGTTCCGCAGCCGTTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGG 1790985 Query 241625 GAC 241627 ||| Sbjct 1790986 GAC 1790988 >seq105 Length=7506826 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||| | ||| ||||| || |||||||| || ||||| | | ||| || | ||| Sbjct 3441075 AGGACTTTCTGCTTGAGCTGCGCCACCTGCTCACGCAGGAGGCTCGCTGTGGACGCCAGC 3441134 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| ||| || ||||| || || |||| |||||| ||||| Sbjct 3441135 TCCGTGTTCTGGCTCTTGAGGGTCTTGACCTTCTCTTCAAGGCGCGAGATGCGCTCCAGC 3441194 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 |||||| |||||| |||| ||| || | ||||| || || | ||| || ||||||||| Sbjct 3441195 TTGCGCTTGCGGCACTTGGAGGCGGCGATACGGTTGCGCAGCCGCTTGCGCTCCGCCTTG 3441254 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 3441255 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 3441287 >seq126 Length=6050536 Score = 118 bits (130), Expect = 2e-21 Identities = 354/534 (66%), Gaps = 18/534 (3%) Strand=Plus/Plus Query 47849 CCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGG 47908 || ||||| |||||||||||||| ||||| || |||| || || | |||||| ||| Sbjct 4678300 CCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCTCCATAAAGTCA 4678359 Query 47909 AAGGGGTTGGGTGTGTTAT-ACACCCGTGTC-AGGCCCATCTGTTCCAGCAG--GTGA-T 47963 || || || | | | | | | || ||| | |||| ||||||||| ||| | Sbjct 4678360 AACGGATTT--TCTACTCTGAAAACCTTGTGGAAACCCA---GTTCCAGCATAAGTGTGT 4678414 Query 47964 CCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGG 48023 |||| || |||| |||| | ||| | ||| || ||| || ||||| | | | Sbjct 4678415 CCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCTTCCCAG 4678474 Query 48024 GCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAA 48083 |||| |||| ||||| ||||||| ||| | || || || || | || | Sbjct 4678475 GCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTATTTCTTTTA 4678534 Query 48084 CGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG-GCATAGAGCATGCAGGCAAAGTCC 48142 | | ||| || ||||||| | |||||| ||| |||| || ||||||||||| Sbjct 4678535 CTCTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCAT----CAGTCAGGCAAAGTCA 4678590 Query 48143 CTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACC 48202 | ||| || || || || | ||| || || | ||||| || | | |||||||| | Sbjct 4678591 CAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCATCAGT 4678649 Query 48203 CCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACT 48262 || | | ||||||||||| |||| || ||||| ||||| || ||||| || |||||| Sbjct 4678650 CCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCCACT 4678709 Query 48263 GCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC-AGGAAAG 48321 || || || || | | ||||| | | ||| | ||||| |||| | | ||| Sbjct 4678710 GCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCAAG 4678769 Query 48322 CGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 ||||| ||||||||||||||| || |||| | || || || |||||| Sbjct 4678770 GCCCCAG-CTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAG 4678822 >seq1 Length=73491278 Score = 91.5 bits (100), Expect = 3e-13 Identities = 87/109 (80%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 213543 TCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG-TT 213601 || |||||||||||||||||| |||||| ||||||||||| ||| ||| ||| || || Sbjct 30997181 TCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGG-TTGCTTTTCCGATT 30997123 Query 213602 GGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 |||||| ||||| |||||||| |||| || |||||| ||| ||| Sbjct 30997122 ACAAGAATCTTTGTACAGCATGTATGGGGTTCCTGTCTCTGTCTGAGAC 30997074 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 |||| | |||||| || || || | ||| || || ||| |||||||||| | | Sbjct 30995008 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 30994949 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || ||| ||| | ||| || | ||| ||||| ||||||||||| || ||||| ||| Sbjct 30994948 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCAAGGC 30994889 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGG 213958 |||| |||||| |||||||| || || Sbjct 30994888 TCCAAGTAGATAGCAAAGGCCCCAGG 30994863 >seq66 Length=10854146 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | || || || | ||||| |||| ||| Sbjct 5688391 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCTAGCTTCCTTTTCCGGCACTTGGAGGCA 5688450 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| |||||||||| Sbjct 5688451 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 5688510 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 5688511 ATGGGGGAC 5688519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931442057061120