Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 4e-14 seq158 84.2 2e-11 seq25 82.4 6e-11 >seq21 Length=25602908 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACA-TTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 || ||||| |||||||||| ||| ||| ||| || ||||| || ||| | ||||| Sbjct 20609669 AAGATGCAGATATTTGTAATAACCCTTATGGGGGAAGACCATCACTCTCGAGATTGAACC 20609728 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 | || || | | || | ||| || ||| || ||||| ||| | || || Sbjct 20609729 CTTGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGA 20609788 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||| || ||||| || ||||| ||||| ||| |||||||| ||| || | || || Sbjct 20609789 TCAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTGTGTCTGACTA 20609848 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| || || ||||| ||| | ||||||||| | || || || Sbjct 20609849 CAACATTCAAAAGGAGTCCACTCTTCACCTTGTATTAAGACTTCGTGGTGG 20609899 >seq158 Length=4245986 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||||||||| | || || || ||||| || ||| ||||| Sbjct 3727621 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCC 3727680 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || | ||| || ||| || || || ||| | || ||| Sbjct 3727681 TCGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3727740 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || ||||| || ||||| ||||| ||| |||||||| | ||| || | || || Sbjct 3727741 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGAGATACTTTGTCTGACTAC 3727800 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGA 28769 ||||||||||| || || ||||| || | || |||||| Sbjct 3727801 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 3727839 >seq25 Length=21972308 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||||||||| | || || || ||||| || || ||||| Sbjct 20948347 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCC 20948406 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || ||| | | | | ||| || ||| || || || ||| | || ||| Sbjct 20948407 TCGGATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 20948466 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || ||||| || ||||| ||||| ||| |||||||| | ||| || | || || Sbjct 20948467 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTAC 20948526 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| || || ||||| || | || |||||| | || || || Sbjct 20948527 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACTTCGTGGTGG 20948576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425364396248547