Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq6 378 8e-100 seq122 147 3e-30 >seq6 Length=46294980 Score = 378 bits (418), Expect = 8e-100 Identities = 681/987 (69%), Gaps = 15/987 (2%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 ||| || || |||||||| |||| ||| || ||| ||||| ||| || ||||| || Sbjct 34723802 CAGGTGCTCATCCAGACACTGGATGGCAAAGTGGTCGACGTCCATGTCAAACTTATTGGC 34723743 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| | || | || ||||||| || |||||| | ||||||||||| || Sbjct 34723742 AAACAAGTGGTGCGTGTGC---AGCATCCAGTTCAGGTCTCCAGCGCCGAACACGCACAC 34723686 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 || || | ||| || |||| || ||||| |||| || || | || || || Sbjct 34723685 CGAGCGCACGTGGGTCCCCGTGCAGGGTGGGTAGGGAGCGCCCTTAGAAGTATCCCCCTC 34723626 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||||||||||||| |||||||| || | || |||||||||| |||||| || | Sbjct 34723625 ATAGTACTGCCACTTGACAAACCTCGCCACCGAGAGCATGTCGGACAAGTCGTACTTATG 34723566 Query 160292 CATCAGGGGAACGGCA-CCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTT 160350 ||| || | || | || ||||| | || || | || | |||||||| || | | Sbjct 34723565 GCTCAAGG-AGCGTGAGCCAGGAACTTCAGGGATCCTTTGGATAGTGGCCCAGAGATACT 34723507 Query 160351 CGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAA--CCTGTCCCG 160408 | || |||||||||||||||| | ||| ||||| |||| | |||| | | | | Sbjct 34723506 CATCCGGGCTGTACGTGTCCTGCGCCCACTCCATAAACTTTTGGATTTTTTCATTTTCT- 34723448 Query 160409 CAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGG 160468 || |||| || || || || | || ||||| || || ||||| ||||| | || Sbjct 34723447 -AGCACGTACGTCACATATTCCCTACTGACCACAAAATAGGCACTGCCCGAGAAAAGAGG 34723389 Query 160469 TATGGGTATAGGCGGCGTGT-CTTTGTCCTGA--CCGGTGTTAGACACCACTCCTTTCAC 160525 | | | |||| | | | || || | || ||||| | || | ||| | | Sbjct 34723388 CGT---TTCAAGCGGAGGATGCGTTTTCACGGTCCCCGTGTTGGTCAGCTTTCCGTCAAT 34723332 Query 160526 CAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAG 160585 | ||| | |||||||||||||| | || || ||||||| ||||| || || Sbjct 34723331 GACCGCATACCGCTTCTTCCACCTCTCTTCTTTATGGAGTGGCATCTTCTCCGTTTCAAG 34723272 Query 160586 ACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGG 160645 |||| |||| || ||| || |||| | ||||||| |||||||| || |||| || Sbjct 34723271 GTTGTTCTCACCCATGAACGACTTGAGCTTCCTGACGATTTCTAGGTTGGTTTTGATGGG 34723212 Query 160646 AAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTC 160705 ||| || ||||||| | ||||||| ||||||||| | || | || ||| ||||| Sbjct 34723211 AAAATCCATACCGCAAAGATTTATCAAGTACTTCCAGTCTGCACGCATTCTGTGAAGGTC 34723152 Query 160706 CCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAG 160765 | ||||||| || | || ||||| || |||||||| || || || || || |||| | Sbjct 34723151 CTTCATGCAGTTGAGGTCAGCCTGAACCCGGCTCCATGATGCATAAACCACACTCTCCAA 34723092 Query 160766 TTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAA 160825 || ||||||||||||||| |||| |||||| || | || |||| |||||| | ||| Sbjct 34723091 TTGACTGGCCACAAAGACATTATTGAAACAGGATGCAATGCCCATCACCGCAGCTAGGAA 34723032 Query 160826 CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGC 160885 || || | |||| |||||| || | |||||| | ||||||||| |||||||| Sbjct 34723031 GGGCTGCTCTGATTTTCTGTCCACATGGATGCAATAGAAATTCTGAGGCATATAGATGGC 34722972 Query 160886 CCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGG 160945 ||| || | ||| |||| ||| || || || ||||| | ||||||||| |||||||| || Sbjct 34722971 CCTCAGGAGCCTGTCGAGCATTTCGATTTTGTGATGAACCACGATAGAATAGGCTATTGG 34722912 Query 160946 AAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATA 161005 |||| | | ||| || || |||| | || | ||| || || ||||||| ||| | Sbjct 34722911 AAACCCCGCCTCTTCTTTGCTAAGGGGTTCCGTAATGTATTTGCGGCTCTTGATGAAAGA 34722852 Query 161006 ATCACAATCCCGCGTCATGTTGATATA 161032 | | || |||| |||||||| | ||| Sbjct 34722851 AGCGCAGTCCCTGGTCATGTTTAGATA 34722825 >seq122 Length=6483299 Score = 147 bits (162), Expect = 3e-30 Identities = 209/294 (71%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 168150 TATAGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCAC 168209 || || || | ||| ||| |||| ||||| | || | || || || |||||||| ||| Sbjct 1888177 TAAAGGGTGAGGCAGGTTCTTCCTGAAATTATCCCAGCACCAAAGGTATTGAAGAGACAC 1888118 Query 168210 ATGAAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGG 168269 | | | || ||||| ||||||| |||||||||||| || || | ||||||||| ||| Sbjct 1888117 AGGTAACACCCTTCATCCTCCAGGGTGGTATTCCAGAAGGTGATGGTTGAGTTTTCGAGT 1888058 Query 168270 CCCAACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTC 168329 ||| || || ||| ||| | |||||| ||| || |||||||| || || || Sbjct 1888057 TCCAGCTCGGTGATGGTCATCCTGCTTTTATAGTAAGGCTGGACTACAACCCCATGTATC 1887998 Query 168330 TCGCTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATC 168389 | |||| ||||||||||||| || ||| | | ||| | | || |||||||| || ||| Sbjct 1887997 TTGCTGTAGGTGGCCATGTTGTCTGGGATTATAGCCGTCTTTTTTTGCCAGGTCACAATC 1887938 Query 168390 AGAACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGC 168443 | | || | | || | || || ||||| | ||||| |||||||||||| Sbjct 1887937 AAGATTTCCTCAGAAGTTTTCACAGAGCATCTTAAGGAAGCAGGAGTGTTCAGC 1887884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577162971634680