Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq21 113 9e-20 seq72 102 2e-16 seq51 91.5 3e-13 >seq21 Length=25602908 Score = 113 bits (124), Expect = 9e-20 Identities = 167/233 (72%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | |||||| | || | ||| | ||| ||| || || || || |||| Sbjct 20609900 ACCACCACGAAGTCTTAATACAAGGTGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 20609842 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | | || ||| |||| |||| ||| || |||||||| || | ||| || |||||||| | Sbjct 20609841 ACACAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAG 20609782 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||||||||| || || || || ||||| ||| | ||| | | ||| | Sbjct 20609781 GAATTCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCAAGGGTTCAA 20609722 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAA-TGTTTTAATAAATATCTGCATTTT 192539 || ||||| ||||| || || ||| ||| | | |||||||||||| || Sbjct 20609721 TCTCGAGAGTGATGGTCTTCCCCCATAAGGGTTATTACAAATATCTGCATCTT 20609669 >seq72 Length=9996315 Score = 102 bits (112), Expect = 2e-16 Identities = 166/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||| | ||| || | ||| | ||||| ||| || | || || || ||||| Sbjct 7284770 ACCACCACGAAGTCTTAACACAAGATGAAGAGTAGACTCCTTTCAAATGTTGTAGTCAGA 7284829 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || || |||| |||| ||| || ||||||| || | ||| || |||||||| | Sbjct 7284830 CAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAGAATGAGTCTTTGCTGATCAGGAGA 7284889 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG--AATCTGACGATTCT 192486 |||||||||||||| || || || |||||| | || ||| |||||||| ||| Sbjct 7284890 AATTCCTTCTTTATCCTGGATCTTGGCCTTTACACT--TTCTAGTATATCTGACGGTTCA 7284947 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT----AAATATCTGCATTTT 192539 | | ||||| | |||||| || | | ||||| | ||| |||||||| || Sbjct 7284948 ATCTGGAGAGTGACGGTTTTTCCCATAAGGGTTTTTTTTTCCAAAAATCTGCATCTT 7285004 >seq51 Length=12882142 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| || ||||| | || | |||| || | |||||| |||||| || ||||| Sbjct 9170556 CCACCCCTCAGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGAA 9170497 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || | |||| || || || || ||||||||||| | ||||| || ||||| || Sbjct 9170496 AGAGTACCACCATCTTCAAACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 9170437 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||||||||| || || || ||||| || | || | || || Sbjct 9170436 ATACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 9170377 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || ||||| || ||||| | |||| || || || |||||||| Sbjct 9170376 TCCAGGGTGATGGTCTTGCCAGTCAGGCTTTTTATGAAGATTTGCATTTT 9170327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984381701825550