Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq591 161 1e-33 seq174 161 1e-33 seq223 125 9e-23 seq285 122 1e-21 seq29 116 5e-20 seq3 86.0 8e-11 >seq591 Length=18291 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 5918 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 5859 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||||| | ||||||| |||| | Sbjct 5858 TGGTGGAGCGCTTGTTGTAATGGGCCAGGCGGGACGCCTCCCCGGCGATGCGCTCGAAGA 5799 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 5798 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 5739 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 5738 GGACCTGCTTCAGCACCTTGTA 5717 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 12374 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 12433 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||||| | ||||||| |||| | Sbjct 12434 TGGTGGAGCGCTTGTTGTAATGGGCCAGGCGGGACGCCTCCCCGGCGATGCGCTCGAAGA 12493 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 12494 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 12553 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 12554 GGACCTGCTTCAGCACCTTGTA 12575 >seq174 Length=3635917 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 3301500 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 3301441 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||||| | ||||||| |||| | Sbjct 3301440 TGGTGGAGCGCTTGTTGTAATGGGCCAGGCGGGACGCCTCCCCGGCGATGCGCTCGAAGA 3301381 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 3301380 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 3301321 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 3301320 GGACCTGCTTCAGCACCTTGTA 3301299 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||||||||| || | || Sbjct 3368011 GCTTGGCCAGCTCCCCAGGTAACAGCAGGCGCACGGCCGTCTGGATCTCCCGAGATGTGA 3367952 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| ||||| | ||||||||||| ||| || | | || || |||| | Sbjct 3367951 TGGTGGAGCGTTTGTTGTAATGCGCCAGACGCGAGGCTTCACCGGCTATACGTTCGAAGA 3367892 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||||||||||| ||| | ||| || || || ||| || | Sbjct 3367891 TGTCGTTGACAAACGAGTTCATGATACCCATTGCCTTAGAAGAAATACCGGTGTCCGGAT 3367832 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 3367831 GGACCTGCTTCAGCACTTTGTA 3367810 >seq223 Length=2232465 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || ||| | |||||||||||||||||||||||| || | | | Sbjct 1542466 GCTTGGCTAGCTCTCCCGGCAGCAGCAGGCGCACGGCGGTCTGGATCTCCCGGGAGGTAA 1542525 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||||||| |||||| ||||||| || | | Sbjct 1542526 TGGTCGAGCGCTTGTTGTAATGCGCCAGACGAGATGCCTCGCCTGCGATGCGCTCAAAAA 1542585 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||| ||||||| ||| | || |||||||| ||| |||| Sbjct 1542586 TGTCGTTGACAAACGAATTCATGATGCCCATGGCTTTAGAAGAGATGCCGGTGTCCGGGT 1542645 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 1542646 GGACCTGCTTCAGCACTTTGTA 1542667 Score = 95.1 bits (104), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | || ||||||||| || |||||||| | | || Sbjct 1483993 GCTTGGCCAGCTCCCCAGGCAACAGCAAGCGCACGGCAGTTTGGATCTCCCTGAAGGTGA 1484052 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||| || ||||| || | |||| |||| Sbjct 1484053 TGGTCGAGCGCTTGTTGTAGTGCGCCAGATGGGATGCCTCACCGCAG-TGCGCTCGAA-- 1484109 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||||||||||| ||| | |||| |||||||| |||||| | Sbjct 1484110 -------GACTAACGAGTTCATGATTCCCATGGCCTTGGACGAGATGCCGGTGTCGGGAT 1484162 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 1484163 GGACCTGCTTTAGCACCTTGTA 1484184 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||||||| ||| | |||||| ||||| ||||||||||| | | || Sbjct 1563913 GCTTGGCCAATTCGCCGGGCAGCAGCAGGCGGACGGCAGTCTGGATCTCCCTGGAAGTGA 1563972 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || |||||||| || || | ||||| || | | Sbjct 1563973 TGGTCGAACGCTTGTTGTAATGGGCCAGACGAGAAGCTTCACCCGCAATGCGCTCAAAAA 1564032 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| ||| | ||| || || || ||| || | Sbjct 1564033 TGTCGTTGACGAAGGAATTCATGATGCCCATAGCCTTAGAAGAAATACCAGTGTCCGGAT 1564092 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 1564093 GGACCTGCTTTAGCACCTTGTACACGTACACCGAGTA 1564129 Score = 89.7 bits (98), Expect = 6e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||||| || || ||||| ||||| | | ||| || ||||||||| | ||||| Sbjct 2074154 CAGGCGTACAGCTGTCTGAATCTCCCTGGAAGTGATGGTAGAGCGCTTGTTATAATGCGC 2074095 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || |||||| | | || || || | |||||||| || || |||||||||| Sbjct 2074094 CAGGCGTGACGCCTCGCCGGCAATACGCTCAAAAATGTCGTTCACGAAGGAGTTCATGAT 2074035 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGA 1254546 ||| | |||| |||||||| ||| || || |||||||| | ||||||||||| Sbjct 2074034 GCCCATAGCCTTGGAAGAGATGCCTGTGTCCGGATGAACCTGCTTCAACACCTTGTAGA 2073976 Score = 86.0 bits (94), Expect = 8e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| | ||||||||||||||||| ||||| | | || Sbjct 1572513 GCTTGGCCAATTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGAATCTCCCTGGAAGTGA 1572454 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || || || || | ||||||| ||| |||||| | || || |||| | Sbjct 1572453 TGGTCGAACGTTTATTGTAATGCGCCAAACGAGAGGCCTCACCTGCAATTCGCTCGAAGA 1572394 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || || ||||||| ||| | |||| || ||||| |||||| | Sbjct 1572393 TGTCGTTAACGAAGGAATTCATGATGCCCATGGCCTTGGAAGAAATGCCGGTGTCGGGAT 1572334 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || | ||||||||| Sbjct 1572333 GGACCTGTTTCAACACCTTGTA 1572312 >seq285 Length=1077187 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| | | | ||||||||| || || || | |||||| | || Sbjct 882375 GCTTGGCTAGCTCCCCGGGAAGCAGCAGGCGCACAGCCGTTTGCACCTCGCGGGACGTGA 882316 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| || | || || |||| | Sbjct 882315 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCTGGCAATACGCTCGAAGA 882256 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| || ||||||| ||| | |||| ||||| || ||| |||| Sbjct 882255 TGTCGTTGACAAAGGAATTCATGATGCCCATGGCCTTGGATGAGATACCGGTGTCTGGGT 882196 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 882195 GTACCTGCTTCAACACCTTGTA 882174 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| | | | || |||||| || ||||| | |||||| | | Sbjct 890667 GCTTGGCCAACTCCCCGGGAAGCAGCAAGCGCACTGCCGTCTGCACCTCGCGGGACGTAA 890726 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| || ||||||| | | || || |||| | Sbjct 890727 TGGTCGAGCGCTTGTTGTAGTGAGCCAGGCGAGAGGCCTCGCTAGCAATACGCTCGAAAA 890786 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| |||||| || ||| || | Sbjct 890787 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATACCGGTGTCTGGAT 890846 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 890847 GCACCTGCTTCAGCACCTTGTA 890868 >seq29 Length=19069880 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| || ||| | |||||| ||||| ||||||||||| | | | || Sbjct 18446748 GCTTGGCCAGTTCCCCAGGCAACAGCAGGCGGACGGCAGTCTGGATCTCTCTGGAGGTGA 18446807 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| || |||||| | ||||| |||| | Sbjct 18446808 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGAGAGGCCTCACCCGCAATGCGCTCGAAGA 18446867 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || || ||||| | ||| | |||| |||||||| ||| |||| Sbjct 18446868 TATCGTTGACGAAGGAATTCATAATTCCCATAGCCTTGGATGAGATGCCGGTGTCAGGGT 18446927 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 18446928 GGACCTGCTTCAACACCTTGTA 18446949 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| || ||||| ||||||||||| | | | || Sbjct 18476687 GCTTGGCCAGCTCCCCGGGCAACAACAGACGAACGGCAGTCTGGATCTCTCTGGAGGTGA 18476628 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| || ||||| | ||||| |||| | Sbjct 18476627 TGGTGGAGCGCTTGTTGTAATGTGCCAGGCGAGAAGCCTCACCCGCAATGCGCTCGAAGA 18476568 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || || ||||||| ||| | ||| |||||| || |||||| | Sbjct 18476567 TATCGTTGACGAAGGAATTCATGATGCCCATTGCCTTAGAGGAGATACCGGTGTCGGGAT 18476508 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 18476507 GAACCTGCTTCAGCACCTTGTA 18476486 >seq3 Length=48283576 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| ||||| Sbjct 41717247 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 41717306 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || || ||||| ||||||||||| || ||||| Sbjct 41717307 ATGATCAAGGGGAAAACTCCTGAAGAGATTCGCAAGACCTTCAATATCAA 41717356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106499669925381