Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq158 127 2e-24 seq25 118 1e-21 seq102 105 6e-18 seq9 105 6e-18 seq96 98.7 9e-16 seq65 98.7 9e-16 seq21 98.7 9e-16 seq212 91.5 1e-13 seq46 91.5 1e-13 seq94 86.0 6e-12 >seq158 Length=4245986 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || || || || || || || ||||| || ||| || | Sbjct 3727623 GATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCCTC 3727682 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| || || |||||||| || || |||||||| ||||| ||||| Sbjct 3727683 GGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 3727742 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| | | || ||||| || || || ||||| ||| |||| || | ||| || || | Sbjct 3727743 GCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATG-GAGATACTTTGTCTGACTACA 3727801 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 ||||||||||||| || || || || | ||||| Sbjct 3727802 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 3727835 >seq25 Length=21972308 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || || || || || || || || || || ||| || | Sbjct 20948349 GATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCCTC 20948408 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| ||| || |||||||| || || |||||||| ||||| ||||| Sbjct 20948409 GGATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 20948468 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| | | || ||||| || || || ||||| ||| || | || | ||| || || | Sbjct 20948469 GCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATG-GACATACTTTGTCTGACTACA 20948527 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 ||||||||||||| || || || || | ||||| Sbjct 20948528 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 20948561 >seq102 Length=7754592 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || ||||| || | || || || || || ||||| || || || | Sbjct 7635764 GATGCAGATGTTCATAAAAACCCTCATGGGGAAGACCATCACTCTCGAGGTTGACCCCTC 7635823 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| || || |||||||| || || |||||||| ||||| ||||| Sbjct 7635824 GGATACAATAGAAAATGTGAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 7635883 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | | ||||| || || || ||||| ||| | | |||| || || || Sbjct 7635884 GCAAAGACTCGTTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 7635943 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||||||||||| || || || || | ||||| Sbjct 7635944 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 7635976 >seq9 Length=38779656 Score = 105 bits (116), Expect = 6e-18 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| |||||| || || || ||||| || || ||| | || ||| || | Sbjct 2389278 GATGCAGAT-TTTCGTAAAACCCTTACAGGGAAAACCATCACACTCAAGGTTGAACCCTC 2389220 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || | |||||| || ||| |||||||| || || ||||||| ||||| ||||| Sbjct 2389219 AGATATGATAGAAAATGTGAAAGCCAAGATCCAGGATAAGTAAGGAATTCCTCCTGATCA 2389160 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | || ||||| || || || || || |||| | | |||| || || || Sbjct 2389159 GCAAAGACTCATTTTTGCTGGCAAGCAACTAGAAGATTGATGTACTTTGTCTGACTACAA 2389100 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||||||||||| || || || || | ||||| Sbjct 2389099 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 2389067 >seq96 Length=8018273 Score = 98.7 bits (108), Expect = 9e-16 Identities = 170/248 (69%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCT-------CGAAGTAG 24755 ||||||||||||| | || || || | || || |||||||| || ||| || | Sbjct 7717167 GATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACTATTACCCTTGAGGTCCGAGGTCG 7717108 Query 24756 AAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTC 24815 || ||| ||||| | || | || ||| || |||||||| || || || || || | Sbjct 7717107 AACCCAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCAC 7717048 Query 24816 CCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAG 24875 | || || || ||| |||| ||||| || |||||||| |||||| | | | |||| Sbjct 7717047 CTGACCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAGGATGGCCGCACTCTTTCAG 7716988 Query 24876 ATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAA 24935 |||| ||||| || || | || || || ||| ||||| | || || | || ||| | Sbjct 7716987 ATTACAACATCCAGAAATAGTCTACCCTGCACCTGGTGCTTCGTGTGAGAGGTGGCATCA 7716928 Query 24936 CTGAGCCA 24943 ||||||| Sbjct 7716927 TTGAGCCA 7716920 >seq65 Length=11138919 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || | || || || || ||||| || ||| || | Sbjct 6551789 GATGCAGATTTTCGTAAAAACCCTCACGAGGAAGACCATCACTCTCGAGGTTGAACCCTC 6551848 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| || || |||||||| || || ||||| || ||||| ||||| Sbjct 6551849 AGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCA 6551908 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| | | || ||||| || || || ||||| ||| || | || | ||| || || Sbjct 6551909 GCAAGGACTCATTTTTGCTGGCAAGCAACTGGAAGATG-GATATACTTTGTCTGACTACC 6551967 Query 24882 ACATTCAAAAGGA 24894 ||||||||||||| Sbjct 6551968 ACATTCAAAAGGA 6551980 >seq21 Length=25602908 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAA-ACTATTACGCTCGAAGTAGAAGCCA 24761 ||||||||| ||| | | ||| || | || || || || || ||||| | ||| || Sbjct 20609671 GATGCAGATATTTGTAATAACCCTTATGGGGGAAGACCATCACTCTCGAGATTGAACCCT 20609730 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 || ||| |||||| || || |||||||| || ||||||||||| ||||| |||| Sbjct 20609731 TGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATC 20609790 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | ||| | | || ||||| || || || ||||| ||| | | |||| || || | Sbjct 20609791 AGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTGTGTCTGACTACA 20609850 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 ||||||||||||| || || || ||| | || || Sbjct 20609851 ACATTCAAAAGGAGTCCACTCTTCACCTTGTATT 20609884 >seq212 Length=2426081 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || || || | ||| || | Sbjct 1901087 GATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCCTC 1901146 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| || || |||||||| || || |||||||| ||||| ||||| Sbjct 1901147 AGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 1901206 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | || ||||| || || || ||||| ||| || || | || || || Sbjct 1901207 GCAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATG-GACGTACTTT---GACTACAA 1901262 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||||||||||| || || || || | ||||| Sbjct 1901263 CATTCAAAAGGAGTCCACTCTTCATGTTGTGTT 1901295 >seq46 Length=13992998 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || || || || || || || || || || || ||| Sbjct 3037907 ATGCAAATCTTCGTAAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 3037966 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || |||||||| || |||||||| || Sbjct 3037967 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGGATCCCTCCCGACCAG 3038026 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||||||| | | | || || || ||| Sbjct 3038027 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTACAAC 3038086 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || || || || || ||| |||| |||| Sbjct 3038087 ATCCAGAAAGAGTCAACCCTCCACCTGGTCCTGCG 3038121 >seq94 Length=8087295 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| || || || ||||| || || ||| | || ||| || | || | |||||| Sbjct 5840708 AAAACCCTCACGGGGAAAACCATCACTCTCAAGGTTGAACCCTCAGATAATATAGAAAAT 5840649 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| || || |||||||| ||||| ||||| ||| | | || ||| Sbjct 5840648 GTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTCATTTTT 5840589 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 | || || || ||||| ||| | | |||| || || |||||||||||||| || Sbjct 5840588 CCTGGCAACCAACTGGAAGATGGATGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 5840529 Query 24899 ACACTACACTTGGTGTT 24915 | || || | ||||| Sbjct 5840528 TCTCTTCATGTTGTGTT 5840512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449853774350040