Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq46 114 8e-21 seq96 102 5e-17 seq63 102 5e-17 seq25 98.7 6e-16 seq212 96.9 2e-15 seq158 86.0 4e-12 seq27 86.0 4e-12 seq24 84.2 1e-11 seq105 82.4 5e-11 >seq46 Length=13992998 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||||||||| | ||| ||| ||||| ||||| ||||| || Sbjct 3038133 CCACCCCTCAGGCGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAA 3038074 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 3038073 AGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 3038014 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||| || || || | || || || || || || || | ||| ||| ||| | Sbjct 3038013 ATCCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCCA 3037956 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || ||||| ||||| ||||| ||||| Sbjct 3037955 CCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCAT 3037907 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| || || ||||| || Sbjct 3038608 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGAA 3038549 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || ||||| || || ||||| || | |||||||| | || Sbjct 3038548 AGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 3038489 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||| ||| | Sbjct 3038488 ATACCTTCTTTATCTTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCCA 3038431 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAA 34968 | || | ||| |||||||| || || |||||||| ||||| Sbjct 3038430 CCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAA 3038391 >seq96 Length=8018273 Score = 102 bits (112), Expect = 5e-17 Identities = 157/221 (71%), Gaps = 11/221 (5%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| || ||||| ||||| || || || || |||| |||| Sbjct 7716948 AGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCATCC 7717007 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || || || ||||| || |||||||| | || | |||||||| || Sbjct 7717008 TCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTATCT 7717067 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGG------CCTCG-ACATCAACG 34936 | ||||| |||||| || || || | ||| ||| ||||| || |||| | Sbjct 7717068 TGGATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGTTCGACCTCGGACCTCAAGG 7717125 Query 34937 GTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||| | |||||||| |||||||||||||| Sbjct 7717126 GTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq63 Length=11284890 Score = 102 bits (112), Expect = 5e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| ||| ||| ||||||||||| || || || || || | ||| Sbjct 6709663 AGCACCAGGTGCTGGGTAAACTCTTTCTGAATGTTGTAATCTGAAAGAGTGTGGCCATAC 6709604 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || || ||||| | |||||||| | || | |||||||| || Sbjct 6709603 TCGAGTTGTTTACCTGCAAATATCAGACACTGCTGGTCATATGGAATGCCCTCCTTATCT 6709544 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | ||| ||| ||| || |||| | |||| Sbjct 6709543 TGGATTTTGGCTTTGAC--ATTCTTGATGGTGTCACTGGGCTCAACCTCAAGGCAGATGG 6709486 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || ||||| || |||||||||||||| Sbjct 6709485 TCTTGCCTGTCAGGGTGTTCACAAAGATCTGCAT 6709452 >seq25 Length=21972308 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || |||| ||| |||||| |||||||| ||||| || | | | |||| ||| Sbjct 20948558 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCC 20948499 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 |||||||| || || || || |||| |||||| || | || | || ||||| || | Sbjct 20948498 AGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 20948439 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || || | |||||| || || || || |||| || |||||||| Sbjct 20948438 ATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTTC 20948379 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| |||||||| |||||||| Sbjct 20948378 CCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq212 Length=2426081 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34775 TGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGC 34834 |||| ||| |||||| |||||||| ||||| | || | || |||| ||||||||| Sbjct 1901286 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTC--AAAG--TACGTCCATCTTCCAGTTGC 1901231 Query 34835 TTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTT 34894 || || || || || |||| |||||| || | || | || ||||| || | || || Sbjct 1901230 TTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 1901171 Query 34895 TGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTG 34954 || || | |||||| || || || |||||| || |||||||| |||||| Sbjct 1901170 GCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTGATGGTCTTCCCCGTG 1901111 Query 34955 AGGGTCTTTACAAAGATCTGCATGATAGTGG 34985 ||||| ||||| || |||||||| | |||| Sbjct 1901110 AGGGTTTTTACGAAAATCTGCATCTTGGTGG 1901080 >seq158 Length=4245986 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || |||| ||| |||||| |||||||| ||||| || | | |||| ||| Sbjct 3727832 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTCCATCTTCC 3727773 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 |||||||| || || || || |||| |||||| || | || | || ||||| || | Sbjct 3727772 AGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 3727713 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || || | |||| | || || || || || | || |||||||| Sbjct 3727712 ATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 3727653 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGG 34985 || |||||||| |||||||| |||||||| | |||| Sbjct 3727652 CCTGTGAGGGTTTTTACAAAAATCTGCATCTTCGTGG 3727616 >seq27 Length=20685099 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/211 (69%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| |||| ||||||||| |||| || || ||||| |||| |||| Sbjct 20118080 AGCACCAGGTGTGAGGTGGACTCCTTCTGGGTGTTGTAATCTGATAG--TGCGGCCATCC 20118023 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || | || || || ||||| ||| |||||| | | | |||||||| || Sbjct 20118022 TCAAGCTGTTGGCCTGCAAATATCAGACGTGCCTGGTCAGGTGAGATGCCCTCCTTATCT 20117963 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || | | || | || | | || ||| |||| ||| |||||| Sbjct 20117962 TGGATTTTGAATTCAACATTTTCAATGGTGTCCCTTGGCTTGACCTCAAGGGTGATGGTC 20117903 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 | ||| | ||||| || ||||||||||||| Sbjct 20117902 CTGCCCTTCAGGGTATTCACAAAGATCTGCA 20117872 >seq24 Length=22183420 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/209 (69%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 34771 CAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAG 34830 |||||| | ||| ||| |||| |||||||| || || || |||| |||| | || Sbjct 2924081 CAGGTGCAGGGTAGACTCTCTCTGGATGTTATAATCTGAAAGAATGCGGCCATCCTTGAG 2924140 Query 34831 TTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTAT 34890 || || || | || ||||| | |||||||| | | | |||| ||| || | || Sbjct 2924141 CTGTTTGCCTGTAAATATCAGACACTGCTGGTCAGGTAGAATGCCCTTCTTATCTTGGAT 2924200 Query 34891 TTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||| ||| | || || || | ||| ||| || ||| |||| ||| |||||||| Sbjct 2924201 TTTGGCTTTTAT--ATTCTTGATGGTGTCACTGGGCTTGACCTCAAGGGTGATGGTCTTG 2924258 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| | |||||||| ||||||||||| || Sbjct 2924259 CCCATCAGGGTCTTCACAAAGATCTGTAT 2924287 >seq105 Length=7506826 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/106 (78%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931 |||||||| || | ||||| |||||| || || || | ||| ||| |||||| | Sbjct 3768240 CCCTCCTTATCTTGGATTTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCT 3768183 Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||| |||||||| ||||| |||||||| |||||||||||||| Sbjct 3768182 CAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 3768137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325661866613867