Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq212 95.1 2e-14 seq158 89.7 8e-13 seq9 87.8 3e-12 seq25 86.0 1e-11 >seq212 Length=2426081 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | || || || || || ||| |||||| |||| | Sbjct 1901089 TGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCCTCAG 1901148 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || || || || ||| ||||| ||||| || ||||| | Sbjct 1901149 ATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 1901208 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||||||||||||||| || ||| | || ||| | |||| || || || | Sbjct 1901209 AAAGACTCATTTTTGCAGGCAAGCAACTGGAAGAT----GGACGTACTTTGACTACAACA 1901264 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | ||||| || || ||| | ||| | || ||| || Sbjct 1901265 TTCAAAAGGAGTCCACTCTTCATGTTGTGTTAAGA 1901299 >seq158 Length=4245986 Score = 89.7 bits (98), Expect = 8e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | ||||| || || || ||| | || || |||| | Sbjct 3727625 TGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCCTCGG 3727684 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || || || || ||| ||||| ||||| || ||||| | Sbjct 3727685 ATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 3727744 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGA-ACGTTAACAGATTATAAT 146210 |||||||||||||||| || || ||| | || ||| ||| || || | || || || Sbjct 3727745 AAAGACTCATTTTTGCTGGCAAGCAACTGGAAGAT-GGAGATACTTTGTCTGACTACAAC 3727803 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 || ||||| || || ||| | ||| | || ||| || Sbjct 3727804 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 3727839 >seq9 Length=38779656 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||| | ||| |||| ||||| || || | | || |||| | Sbjct 2389276 TGCAGATTTTCGTAAAACCCTTA-CAGGGAAAACCATCACACTCAAGGTTGAACCCTCAG 2389218 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| || ||||||| ||| || || || ||| |||| ||||| || ||||| | Sbjct 2389217 ATATGATAGAAAATGTGAAAGCCAAGATCCAGGATAAGTAAGGAATTCCTCCTGATCAGC 2389158 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||||||||| || || ||| |||| ||| | || || | || || || | Sbjct 2389157 AAAGACTCATTTTTGCTGGCAAGCAACTAGAAGATTGATGTACTTTGTCTGACTACAACA 2389098 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | ||||| || || ||| | ||| | || ||| || Sbjct 2389097 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 2389063 >seq25 Length=21972308 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | ||||| || || || ||| |||| || |||| | Sbjct 20948351 TGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCCTCGG 20948410 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || || || || || ||| ||||| ||||| || ||||| | Sbjct 20948411 ATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 20948470 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||||||||| || || ||| | || ||| || || | || || || | Sbjct 20948471 AAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACA 20948530 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | ||||| || || ||| | ||| | || ||| || Sbjct 20948531 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 20948565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786089817565560