Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq25 118 8e-22 seq158 114 1e-20 seq212 109 4e-19 seq21 109 4e-19 seq9 105 5e-18 seq102 100 2e-16 seq63 96.9 3e-15 seq94 91.5 1e-13 seq99 89.7 4e-13 seq178 86.0 5e-12 >seq25 Length=21972308 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||||| || || | | || | ||| || Sbjct 20948559 CACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTC 20948500 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||||| | || | |||||||||||| || ||||| || || || || || Sbjct 20948499 CAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 20948440 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || || || |||||| || || || |||| || |||||||| || || || Sbjct 20948439 GATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTT 20948380 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | |||||| ||||| |||||||| || Sbjct 20948379 CCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 20948347 >seq158 Length=4245986 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||||| || || | | || ||| || Sbjct 3727833 CACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATCTCCATCTTC 3727774 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||||| | || | |||||||||||| || ||||| || || || || || Sbjct 3727773 CAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 3727714 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || || ||| |||||| || || || |||| || || ||||| || || || Sbjct 3727713 GATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTT 3727654 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | |||||| ||||| |||||||| || Sbjct 3727653 CCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 3727621 >seq212 Length=2426081 Score = 109 bits (120), Expect = 4e-19 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||||| || || || || || ||| || Sbjct 1901293 CACAACATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA--AA--GTACGTCCATCTTC 1901238 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||| ||| | || | |||||||||||| || ||||| || || || || || Sbjct 1901237 CAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 1901178 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || || ||| |||||| || || || |||| | |||||||| || || || Sbjct 1901177 GATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTGATGGTCTT 1901118 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | |||||| || || |||||||| || Sbjct 1901117 CCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 1901085 >seq21 Length=25602908 Score = 109 bits (120), Expect = 4e-19 Identities = 149/207 (72%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| ||||| || ||||||||||| || || | | || || ||| || ||||| Sbjct 20609875 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACACAGTACGTCCATCTTCCAGTTGC 20609816 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | || | |||||||||||| || ||||| || ||||| || || | || Sbjct 20609815 TTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATCTTG 20609756 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| |||||| || || | |||| | || ||||| || || || || | Sbjct 20609755 GCCTTCACATTTTCTATTGTATCCAAGGGTTCAATCTCGAGAGTGATGGTCTTCCCCCAT 20609696 Query 29764 AA-GGTTTTAACAAATATCTGCATTTT 29789 || |||| | |||||||||||||| || Sbjct 20609695 AAGGGTTATTACAAATATCTGCATCTT 20609669 >seq9 Length=38779656 Score = 105 bits (116), Expect = 5e-18 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||||| || || | | || | |||| || Sbjct 2389069 CACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCAATCTTC 2389128 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||||| | || | |||||||||||| || ||||| || | || || || Sbjct 2389129 TAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTACTTATCCTG 2389188 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || ||| ||| |||||| | || || |||| || | || || || ||||| Sbjct 2389189 GATCTTGGCTTTCACATTTTCTATCATATCTGAGGGTTCAACCTTGAGTGTGATGGTTTT 2389248 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | ||||| ||| || || |||||||| || Sbjct 2389249 CCCTG-TAAGGGTTTTACGAAAATCTGCATCTT 2389280 >seq102 Length=7754592 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||||| || || | | || || ||| || Sbjct 7635974 CACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTC 7635915 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||||| | | | |||||||||||| || ||||| || || || || || Sbjct 7635914 CAGTTGCTTGCCAGCAAAAACGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 7635855 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || || ||| |||||| || || || | || || || ||||| || || || Sbjct 7635854 GATCTTGACCTTCACATTTTCTATTGTATCCGAGGGGTCAACCTCGAGAGTGATGGTCTT 7635795 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | | |||||| | || |||||||| || Sbjct 7635794 CCCCATGAGGGTTTTTATGAACATCTGCATCTT 7635762 >seq63 Length=11284890 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 29566 CTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTG 29625 |||| ||| ||||||| || | || | ||||| |||||||| ||||| | || ||| Sbjct 6709672 CTCAGACGAAGCACCAGGTGCTGGGTAAACTCTTTCTGAATGTTGTAATCTGAAAGAGTG 6709613 Query 29626 CGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCC 29685 | || ||||||||||| || ||| |||||| | ||||| || ||||| ||| Sbjct 6709612 TGGCCATACTCGAGTTGTTTACCTGCAAATATCAGACACTGCTGGTCATATGGAATGCCC 6709553 Query 29686 TCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGA 29745 || || ||||| | ||| ||||||| | | | |||||| | || || ||||| Sbjct 6709552 TCCTTATCTTGGATTTTGGCTTTGACATTCTTGATGGTGTCACTGGGCTCAACCTCAAGG 6709493 Query 29746 GTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || | ||| || ||||| |||||||| Sbjct 6709492 CAGATGGTCTTGCCTGTCAGGGTGTTCACAAAGATCTGCAT 6709452 >seq94 Length=8087295 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| | ||| || ||||||||||| || || | | || | ||| || Sbjct 5840514 CACAACATGAAGAGAGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTC 5840573 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||| | | || | |||||||||||| || ||||| || || || || || Sbjct 5840574 CAGTTGGTTGCCAGGAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 5840633 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | || || ||| |||||| | | || || |||| || | ||||| || ||||| Sbjct 5840634 GATCTTGGCCTTCACATTTTCTATATTATCTGAGGGTTCAACCTTGAGAGTGATGGTTTT 5840693 Query 29757 GCCAGTTAAGGTTTT 29771 || || | |||||| Sbjct 5840694 CCCCGTGAGGGTTTT 5840708 >seq99 Length=7922563 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| ||||||||| | || | |||||||||||| || ||||| || || || || || Sbjct 586245 AGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 586304 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | || || ||| |||||| || || || |||| || || ||||| || || || Sbjct 586305 ATCTTGGCCTTCACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 586364 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | |||||| || || |||||||| || Sbjct 586365 CCCGTGAGGGTTTTTACGAAAATCTGCATCTT 586396 >seq178 Length=3410906 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/214 (70%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||| ||||||| || || || || ||| || Sbjct 768794 CACAAGATGAAGAGTGGACTCCTTTCGAATGTTGTAGTCA--AA--GTATATCCATCTTC 768739 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||| | ||||||||| | || ||||||||||||| || ||| | || || || || || Sbjct 768738 CAGTCGCTTGCCAGCAAAAATGGATCTTTGCTGATCAGGAGGAGTTCCTTCCTTATCCTG 768679 Query 29697 TAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 || || || || ||| |||||| | || ||| |||| | |||| ||| || || | Sbjct 768678 -GATCTTGGTCTTTACATTTTCTATTGCATCTGAAGGTTCATCCTCAAAAGTGATGGTCT 768620 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || | |||||| | || |||||||| || Sbjct 768619 TCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 768586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385182612963813