Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq212 84.2 2e-11 >seq212 Length=2426081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTC 137258 || || | ||||| || || || ||||| |||||||| || | || | || | || Sbjct 1901295 AACACAACATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCA-TC 1901241 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| ||||| || || ||| | || || | ||||||||| ||||| || ||||| || || Sbjct 1901240 TTCCAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1901181 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 || || || | | ||| | ||| |||| |||||| | |||| ||| | || Sbjct 1901180 CTGGATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTGATGGT 1901121 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| || || | ||||||||||| || ||||| Sbjct 1901120 CTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 1901088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488496409707600